RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
CPNE4-209ENST00000512055 ZNF365Q70YC5 407 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 CCDC155Q8N6L0 562 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 STMN2Q93045 179 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 VCX3BQ9H321 246 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 ERBB4Q15303 1308 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 ZNF335Q9H4Z2 1342 aaPredicted RBP12.21□□□□□ -0.45
CPNE4-209ENST00000512055 GTF3C6Q969F1 213 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.45
CPNE4-209ENST00000512055 BRINP3Q76B58 766 aa12.21□□□□□ -0.46
CPNE4-209ENST00000512055 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.46
CPNE4-209ENST00000512055 TFCP2L1Q9NZI6 479 aa12.21□□□□□ -0.46
CPNE4-209ENST00000512055 PCCAP05165 728 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 ST5P78524 1137 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 LLPHQ9BRT6 129 aaKnown RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 PTGS1P23219 599 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 SLF2Q8IX21 1173 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 VPS41P49754 854 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 CACNA2D4Q7Z3S7 1137 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 ZNF76P36508 570 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 PICALMQ13492 652 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 PI16Q6UXB8 463 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 CCNL1Q9UK58 526 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 TPX2Q9ULW0 747 aaKnown RBP12.2□□□□□ -0.46
CPNE4-209ENST00000512055 PPLO60437 1756 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 BICDL2A1A5D9 508 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 NEMFO60524 1076 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 LARGE1O95461 756 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 CYP21A2P08686 494 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 POLD1P28340 1107 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 UBA7P41226 1012 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 VCXQ9H320 206 aa12.2□□□□□ -0.46
CPNE4-209ENST00000512055 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 DNAI2Q9GZS0 605 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 AGLP35573 1532 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 OPA1O60313 960 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 CKAP4Q07065 602 aaKnown RBP12.19□□□□□ -0.46
CPNE4-209ENST00000512055 SH2D4BQ5SQS7 431 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
CPNE4-209ENST00000512055 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 FGAP02671 866 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 UBASH3AP57075 661 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 ATP11AP98196 1134 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 MAP7D1Q3KQU3 841 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 TDRD12Q587J7 1177 aaKnown RBP12.19□□□□□ -0.46
CPNE4-209ENST00000512055 DHX58Q96C10 678 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 SELENOSQ9BQE4 189 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 SPATS2LQ9NUQ6 558 aaKnown RBP12.19□□□□□ -0.46
CPNE4-209ENST00000512055 SPATA31A3Q5VYP0 1347 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 TRIM75PA6NK02 468 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 SKILP12757 684 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 PTPRUQ92729 1446 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 MROH1Q8NDA8 1641 aa12.19□□□□□ -0.46
CPNE4-209ENST00000512055 CTNNA2P26232 953 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 GSDMDP57764 484 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 GSTO1P78417 241 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 CUL4AQ13619 759 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 KIF2CQ99661 725 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 IQCGQ9H095 443 aaKnown RBP12.18□□□□□ -0.46
CPNE4-209ENST00000512055 PIGBQ92521 554 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 TMOD2Q9NZR1 351 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 INPP5BP32019 993 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 PHKA1P46020 1223 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 BCAMP50895 628 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 TTC16Q8NEE8 873 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 GSDMBQ8TAX9 411 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
CPNE4-209ENST00000512055 TMEM87BQ96K49 555 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 MROH5Q6ZUA9 1318 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 ATICP31939 592 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 KCNQ4P56696 695 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 MAP7Q14244 749 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 DACT3Q96B18 629 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-209ENST00000512055 ADCY9O60503 1353 aa12.18□□□□□ -0.46
CPNE4-209ENST00000512055 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
CPNE4-209ENST00000512055 HIBADHP31937 336 aaKnown RBP12.17□□□□□ -0.46
CPNE4-209ENST00000512055 COG7P83436 770 aa12.17□□□□□ -0.46
CPNE4-209ENST00000512055 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms