RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 SALL3Q9BXA9 1300 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 DOCK1Q14185 1865 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 NAV1Q8NEY1 1877 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 PHF20L1A8MW92 1017 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 TRPA1O75762 1119 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 ALDH1A1P00352 501 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
PTCD2-209ENST00000511752 GTF2A2P52657 109 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 NUCB1Q02818 461 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 PPATQ06203 517 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 CHD1LQ86WJ1 897 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 FOXP4Q8IVH2 680 aaPredicted RBP15.06■□□□□ 0
PTCD2-209ENST00000511752 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 CRACR2BQ8N4Y2 399 aaPredicted RBP15.06■□□□□ 0
PTCD2-209ENST00000511752 PICK1Q9NRD5 415 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 STAP2Q9UGK3 403 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 SAP30BPQ9UHR5 308 aaKnown RBP15.06■□□□□ 0
PTCD2-209ENST00000511752 SIPA1L1O43166 1804 aa15.06■□□□□ 0
PTCD2-209ENST00000511752 CTNND1O60716 968 aaKnown RBP15.05■□□□□ -0
PTCD2-209ENST00000511752 PDE1AP54750 535 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 PPIL2Q13356 520 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 TTC6Q86TZ1 520 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 IFNL1Q8IU54 200 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 LCORLQ8N3X6 602 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 ARMT1Q9H993 441 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 TSKSQ9UJT2 592 aa15.05■□□□□ -0
PTCD2-209ENST00000511752 ATAD5Q96QE3 1844 aa15.04■□□□□ -0
PTCD2-209ENST00000511752 FAM196BA6NMK8 535 aa15.04■□□□□ -0
PTCD2-209ENST00000511752 RNF113AO15541 343 aaKnown RBP15.04■□□□□ -0
PTCD2-209ENST00000511752 MBD4O95243 580 aa15.04■□□□□ -0
PTCD2-209ENST00000511752 SNAPC2Q13487 334 aa15.04■□□□□ -0
PTCD2-209ENST00000511752 SLFNL1Q499Z3 407 aa15.04■□□□□ -0
PTCD2-209ENST00000511752 FSD1Q9BTV5 496 aa15.04■□□□□ -0
PTCD2-209ENST00000511752 DDX60LQ5H9U9 1706 aaKnown RBP15.03■□□□□ -0
PTCD2-209ENST00000511752 CCL15-CCL14A0A0B4J2E2 113 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
PTCD2-209ENST00000511752 IRF6O14896 467 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
PTCD2-209ENST00000511752 SLURP2P0DP57 97 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 CETPP11597 493 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 CCL15Q16663 113 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 APPBP2Q92624 585 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 ATP8A2Q9NTI2 1148 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 MCM9Q9NXL9 1143 aa15.03■□□□□ -0
PTCD2-209ENST00000511752 PTPRAP18433 802 aa15.02■□□□□ -0
PTCD2-209ENST00000511752 CAP2P40123 477 aa15.02■□□□□ -0
PTCD2-209ENST00000511752 METTL16Q86W50 562 aaKnown RBP15.02■□□□□ -0
PTCD2-209ENST00000511752 SDR42E1Q8WUS8 393 aa15.02■□□□□ -0
PTCD2-209ENST00000511752 EVI5LQ96CN4 794 aa15.02■□□□□ -0
PTCD2-209ENST00000511752 PUS7LQ9H0K6 701 aaKnown RBP15.02■□□□□ -0
PTCD2-209ENST00000511752 EHD4Q9H223 541 aa15.02■□□□□ -0
PTCD2-209ENST00000511752 DCP1AQ9NPI6 582 aaPredicted RBP15.02■□□□□ -0
PTCD2-209ENST00000511752 SERPINB13Q9UIV8 391 aa15.02■□□□□ -0
PTCD2-209ENST00000511752 IGF2BP3O00425 579 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTCD2-209ENST00000511752 TBC1D8O95759 1140 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 CHGBP05060 677 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 KCNA4P22459 653 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 COL13A1Q5TAT6 717 aaPredicted RBP15.01□□□□□ -0.01
PTCD2-209ENST00000511752 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 BRI3BPQ8WY22 251 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 CFHR5Q9BXR6 569 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 TBC1D2Q9BYX2 928 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 SLC4A4Q9Y6R1 1079 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 ZHX2Q9Y6X8 837 aa15.01□□□□□ -0.01
PTCD2-209ENST00000511752 BAZ2AQ9UIF9 1905 aaKnown RBP15□□□□□ -0.01
PTCD2-209ENST00000511752 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 CXCL11O14625 94 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 PRKAB2O43741 272 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 PLEKHM2Q8IWE5 1019 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 OSBP2Q969R2 916 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 PTPN18Q99952 460 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 DNAJC18Q9H819 358 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 GINM1Q9NU53 330 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 KCNH4Q9UQ05 1017 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 PHIPQ8WWQ0 1821 aa15□□□□□ -0.01
PTCD2-209ENST00000511752 CASP8AP2Q9UKL3 1982 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 ASNSP08243 561 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 GNAT2P19087 354 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 TICAM2Q86XR7 235 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 STRBPQ96SI9 672 aaKnown RBP14.99□□□□□ -0.01
PTCD2-209ENST00000511752 OSBPL3Q9H4L5 887 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 AS3MTQ9HBK9 375 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
PTCD2-209ENST00000511752 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
PTCD2-209ENST00000511752 GPAA1O43292 621 aa14.98□□□□□ -0.01
PTCD2-209ENST00000511752 PLCD1P51178 756 aa14.98□□□□□ -0.01
PTCD2-209ENST00000511752 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
PTCD2-209ENST00000511752 TAF1CQ15572 869 aaPredicted RBP14.98□□□□□ -0.01
PTCD2-209ENST00000511752 NOM1Q5C9Z4 860 aaKnown RBP14.98□□□□□ -0.01
PTCD2-209ENST00000511752 ZMYM1Q5SVZ6 1142 aa14.98□□□□□ -0.01
PTCD2-209ENST00000511752 PTPRFP10586 1907 aa14.98□□□□□ -0.01
PTCD2-209ENST00000511752 MYH8P13535 1937 aa14.98□□□□□ -0.01
PTCD2-209ENST00000511752 PCNTO95613 3336 aa14.97□□□□□ -0.01
PTCD2-209ENST00000511752 A0A0G2JLL6 359 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms