RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 GNAI2P04899 355 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 LINGO3P0C6S8 592 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 GNAT1P11488 350 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 IL13P35225 146 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 MAGEA10P43363 369 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 AMPHP49418 695 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 FANCCQ00597 558 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 NCAPHQ15003 741 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 RRS1Q15050 365 aaKnown RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 HDGFL1Q5TGJ6 251 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 NAA35Q5VZE5 725 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 ENGASEQ8NFI3 743 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 BRF1Q92994 677 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 TSC22D3Q99576 134 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 BPIFA3Q9BQP9 254 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 NUP58Q9BVL2 599 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 IQCGQ9H095 443 aaKnown RBP8.26□□□□□ -1.09
CPNE4-208ENST00000511604 RIPOR2Q9Y4F9 1068 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 CYP46A1Q9Y6A2 500 aa8.26□□□□□ -1.09
CPNE4-208ENST00000511604 RIMS2Q9UQ26 1411 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 INO80Q9ULG1 1556 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 A0A1B0GVL5 298 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 B4DLN1 442 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 LIN7AO14910 233 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 BUB1BO60566 1050 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 CHGBP05060 677 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 CSB-PGBD3P0DP91 1061 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 SCNN1BP51168 640 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 HDGFP51858 240 aaKnown RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 SKOR1P84550 965 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 ATP8B2P98198 1209 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 MTF1Q14872 753 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 SLMAPQ14BN4 828 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 ACBD5Q5T8D3 534 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 SDCCAG8Q86SQ7 713 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 KIAA0825Q8IV33 1275 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 NOA1Q8NC60 698 aaKnown RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 STAMBPL1Q96FJ0 436 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 FAM227BQ96M60 508 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GDAP1L1Q96MZ0 367 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GORASP1Q9BQQ3 440 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 TRIM4Q9C037 500 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 SIL1Q9H173 461 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 HAUS2Q9NVX0 235 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 C15orf41Q9Y2V0 281 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 NSD2O96028 1365 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 VWDEQ8N2E2 1590 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GOLGA6BA6NDN3 693 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 MGRN1O60291 552 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 ABL1P00519 1130 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 A1BGP04217 495 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 CDC25CP30307 473 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 PIP4K2BP78356 416 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GUCY1B3Q02153 619 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 IFT88Q13099 833 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 G3BP1Q13283 466 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 PDCLQ13371 301 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 NECTIN1Q15223 517 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GALNT15Q8N3T1 639 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 ZFAND2BQ8WV99 257 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 TBC1D31Q96DN5 1066 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 USP28Q96RU2 1077 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 LRRC2Q9BYS8 371 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 CABP1Q9NZU7 370 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GGA2Q9UJY4 613 aa8.25□□□□□ -1.09
CPNE4-208ENST00000511604 CDK12Q9NYV4 1490 aaPredicted RBP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPNE4-208ENST00000511604 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
CPNE4-208ENST00000511604 STX10O60499 249 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 TOP1P11387 765 aaKnown RBP8.24□□□□□ -1.09
CPNE4-208ENST00000511604 EIF2S2P20042 333 aaKnown RBP8.24□□□□□ -1.09
CPNE4-208ENST00000511604 NEDD4P46934 1319 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 POGZQ7Z3K3 1410 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 CCDC170Q8IYT3 715 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 QRICH2Q9H0J4 1663 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 MRPL44Q9H9J2 332 aaKnown RBP8.24□□□□□ -1.09
CPNE4-208ENST00000511604 MYO3AQ8NEV4 1616 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 USP32Q8NFA0 1604 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 OPLAHO14841 1288 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 FOXO3O43524 673 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 MCM3P25205 808 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 SFSWAPQ12872 951 aaKnown RBP8.24□□□□□ -1.09
CPNE4-208ENST00000511604 BLMHQ13867 455 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 CREB3L3Q68CJ9 461 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 CCDC73Q6ZRK6 1079 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 VSTM4Q8IW00 320 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 CCDC148Q8NFR7 591 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 HINFPQ9BQA5 517 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 NOD2Q9HC29 1040 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 MYO1AQ9UBC5 1043 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 SUN2Q9UH99 717 aa8.24□□□□□ -1.09
CPNE4-208ENST00000511604 RBM8AQ9Y5S9 174 aaKnown RBP8.24□□□□□ -1.09
CPNE4-208ENST00000511604 ADGRB1O14514 1584 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms