RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 USP17L5A8MUK1 530 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 BCAR3O75815 825 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 TFRCP02786 760 aaKnown RBP10.25□□□□□ -0.77
TRIO-217ENST00000511019 TRIM27P14373 513 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
TRIO-217ENST00000511019 CAP2P40123 477 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 FXR1P51114 621 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIO-217ENST00000511019 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIO-217ENST00000511019 IRF5Q13568 498 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 PI16Q6UXB8 463 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 CCDC84Q86UT8 332 aaPredicted RBP10.25□□□□□ -0.77
TRIO-217ENST00000511019 FOXP4Q8IVH2 680 aaPredicted RBP10.25□□□□□ -0.77
TRIO-217ENST00000511019 TEX11Q8IYF3 940 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
TRIO-217ENST00000511019 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 U2AF1L4Q8WU68 220 aaKnown RBP10.25□□□□□ -0.77
TRIO-217ENST00000511019 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 UNC93B1Q9H1C4 597 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 AS3MTQ9HBK9 375 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 TAOK2Q9UL54 1235 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 NR2E3Q9Y5X4 410 aa10.25□□□□□ -0.77
TRIO-217ENST00000511019 RBBP6Q7Z6E9 1792 aaKnown RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 ELNP15502 786 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 MCAMP43121 646 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 GCLCP48506 637 aaPredicted RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 ATP8B2P98198 1209 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 OS9Q13438 667 aaPredicted RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 TTC39AQ5SRH9 613 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 TREML2Q5T2D2 321 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 ZKSCAN2Q63HK3 967 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 NAA16Q6N069 864 aaPredicted RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 SH3RF3Q8TEJ3 882 aaPredicted RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 DHX36Q9H2U1 1008 aaKnown RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 GPR108Q9NPR9 543 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
TRIO-217ENST00000511019 TNNQ9UQP3 1299 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 AK9Q5TCS8 1911 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
TRIO-217ENST00000511019 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
TRIO-217ENST00000511019 INHAP05111 366 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 PLCG2P16885 1265 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 PPP4CP60510 307 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 UBE2Q1Q7Z7E8 422 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
TRIO-217ENST00000511019 AATFQ9NY61 560 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRIO-217ENST00000511019 C19orf81C9J6K1 198 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 IGSF3O75054 1194 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 FARP2O94887 1054 aaPredicted RBP10.22□□□□□ -0.77
TRIO-217ENST00000511019 HMGCS2P54868 508 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 RRP1BQ14684 758 aaKnown RBP10.22□□□□□ -0.77
TRIO-217ENST00000511019 FAM110CQ1W6H9 321 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 TNNI3KQ59H18 835 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 DBNDD2Q9BQY9 259 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 WDR18Q9BV38 432 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 TRIM34Q9BYJ4 488 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 ASCC2Q9H1I8 757 aaPredicted RBP10.22□□□□□ -0.77
TRIO-217ENST00000511019 TMOD4Q9NZQ9 345 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 FPGT-TNNI3KV9GXZ4 949 aa10.22□□□□□ -0.77
TRIO-217ENST00000511019 ZSWIM8A7E2V4 1837 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 MYH13Q9UKX3 1938 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 EVI5O60447 810 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 ASNSP08243 561 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 BACE1P56817 501 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 POLA2Q14181 598 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
TRIO-217ENST00000511019 SSH3Q8TE77 659 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 ZNF512BQ96KM6 892 aaPredicted RBP10.21□□□□□ -0.77
TRIO-217ENST00000511019 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
TRIO-217ENST00000511019 GJD2Q9UKL4 321 aa10.21□□□□□ -0.77
TRIO-217ENST00000511019 MYH2Q9UKX2 1941 aa10.21□□□□□ -0.78
TRIO-217ENST00000511019 CYP2E1P05181 493 aaPredicted RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 HOXA7P31268 230 aaPredicted RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 ZAP70P43403 619 aa10.2□□□□□ -0.78
TRIO-217ENST00000511019 IRX3P78415 501 aaPredicted RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 P2RX7Q99572 595 aaKnown RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
TRIO-217ENST00000511019 HMX1Q9NP08 348 aaPredicted RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 PAK6Q9NQU5 681 aaPredicted RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 GINM1Q9NU53 330 aa10.2□□□□□ -0.78
TRIO-217ENST00000511019 PALD1Q9ULE6 856 aa10.2□□□□□ -0.78
TRIO-217ENST00000511019 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
TRIO-217ENST00000511019 KIAA0100Q14667 2235 aaKnown RBP10.19□□□□□ -0.78
TRIO-217ENST00000511019 COL2A1P02458 1487 aaPredicted RBP10.19□□□□□ -0.78
TRIO-217ENST00000511019 RPTORQ8N122 1335 aa10.19□□□□□ -0.78
TRIO-217ENST00000511019 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
TRIO-217ENST00000511019 ZBTB7BO15156 539 aaPredicted RBP10.19□□□□□ -0.78
TRIO-217ENST00000511019 HLA-DOAP06340 250 aa10.19□□□□□ -0.78
TRIO-217ENST00000511019 CYP7A1P22680 504 aa10.19□□□□□ -0.78
TRIO-217ENST00000511019 MTMR2Q13614 643 aa10.19□□□□□ -0.78
TRIO-217ENST00000511019 NECAB2Q7Z6G3 386 aa10.19□□□□□ -0.78
TRIO-217ENST00000511019 METTL16Q86W50 562 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms