RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 KCNF1Q9H3M0 494 aa19.18■□□□□ 0.66
CLMAT3-201ENST00000510576 BECN2A8MW95 431 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 PFKFB1P16118 471 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 SAFBQ15424 915 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 SARM1Q6SZW1 724 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 SBF2Q86WG5 1849 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 WDHD1O75717 1129 aaPredicted RBP19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 ZNF202O95125 648 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 KLRK1P26718 216 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 MARCKSP29966 332 aaPredicted RBP19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 CDC25BP30305 580 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 HIBADHP31937 336 aaKnown RBP19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 KIAA1468Q9P260 1216 aa19.17■□□□□ 0.66
CLMAT3-201ENST00000510576 MROH7-TTC4A0A0A0MT08 1334 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 TNKSO95271 1327 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 DEXIO95424 95 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 PTGS1P23219 599 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 PTPAQ15257 358 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 FANCBQ8NB91 859 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 SPTLC3Q9NUV7 552 aa19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
CLMAT3-201ENST00000510576 UBE2Q2LH0YL09 131 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 MMP1P03956 469 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 SEC23AQ15436 765 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 DNTTIP2Q5QJE6 756 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 NBPF11Q86T75 865 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 DHX40Q8IX18 779 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 CRACR2BQ8N4Y2 399 aaPredicted RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 ZNF384Q8TF68 577 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 ARHGEF1Q92888 912 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 ERCC4Q92889 916 aaPredicted RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 NSUN4Q96CB9 384 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 EP400Q96L91 3159 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 A0A087WWV3 80 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 GUCY1A2P33402 732 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 NOSTRINQ8IVI9 506 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 CCDC24Q8N4L8 307 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 CLIP2Q9UDT6 1046 aa19.15■□□□□ 0.66
CLMAT3-201ENST00000510576 KIAA1551Q9HCM1 1747 aa19.14■□□□□ 0.66
CLMAT3-201ENST00000510576 NPHP1O15259 732 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 MECOMQ03112 1051 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 PPP2R5BQ15173 497 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 CCDC186Q7Z3E2 898 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 C17orf53Q8N3J3 647 aaPredicted RBP19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 KIAA1524Q8TCG1 905 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 PYCARDQ9ULZ3 195 aa19.14■□□□□ 0.65
CLMAT3-201ENST00000510576 CUTAO60888 179 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 SYKP43405 635 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 DIS3L2Q8IYB7 885 aaKnown RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 AOPEPQ8N6M6 819 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 GJD4Q96KN9 370 aaPredicted RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 ZSCAN10Q96SZ4 725 aaPredicted RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 TRPC5Q9UL62 973 aaPredicted RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 CYP2D7A0A087X1C5 515 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 CHAF1AQ13111 956 aaPredicted RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 FAM182BQ5T319 152 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 CCDC82Q8N4S0 544 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 MRFAP1L1Q96HT8 127 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 CRNKL1Q9BZJ0 848 aaKnown RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 FOXP1Q9H334 677 aaPredicted RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 KCNJ14Q9UNX9 436 aa19.13■□□□□ 0.65
CLMAT3-201ENST00000510576 BTBD18B2RXH4 712 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 SMIM22K7EJ46 135 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 RFC4P35249 363 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 CTR9Q6PD62 1173 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 TMED8Q6PL24 325 aaPredicted RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 SHC4Q6S5L8 630 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 IQCA1Q86XH1 822 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 ENAHQ8N8S7 591 aaPredicted RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 BPIFA3Q9BQP9 254 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 HPSEQ9Y251 543 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 FAM237AA0A1B0GTK4 181 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 TM4SF1P30408 202 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 NLRP12P59046 1061 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 AKAP17AQ02040 695 aaKnown RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 IFIT1BQ5T764 474 aaKnown RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 RESP18Q5W5W9 173 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 CATIPQ7Z7H3 387 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 AMIGO3Q86WK7 504 aa19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 CMTR1Q8N1G2 835 aaKnown RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 RNF26Q9BY78 433 aaPredicted RBP19.12■□□□□ 0.65
CLMAT3-201ENST00000510576 FGRP09769 529 aa19.11■□□□□ 0.65
CLMAT3-201ENST00000510576 DPCR1Q3MIW9 517 aa19.11■□□□□ 0.65
CLMAT3-201ENST00000510576 POTEAQ6S8J7 498 aa19.11■□□□□ 0.65
CLMAT3-201ENST00000510576 AATFQ9NY61 560 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLMAT3-201ENST00000510576 NRBP1Q9UHY1 535 aa19.11■□□□□ 0.65
CLMAT3-201ENST00000510576 USP17L12C9JPN9 530 aa19.1■□□□□ 0.65
CLMAT3-201ENST00000510576 USP17L21D6R901 530 aa19.1■□□□□ 0.65
CLMAT3-201ENST00000510576 RILPL1Q5EBL4 403 aa19.1■□□□□ 0.65
CLMAT3-201ENST00000510576 TRAPPC3LQ5T215 181 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms