RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
CLDND1-221ENST00000510541 KCNH4Q9UQ05 1017 aa20.8■□□□□ 0.92
CLDND1-221ENST00000510541 SIPA1L1O43166 1804 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 MYH1P12882 1939 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-221ENST00000510541 CTCFP49711 727 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-221ENST00000510541 GTF2A2P52657 109 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 TSHZ3Q63HK5 1081 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 TATDN1Q6P1N9 297 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 OPTNQ96CV9 577 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 STRBPQ96SI9 672 aaKnown RBP20.79■□□□□ 0.92
CLDND1-221ENST00000510541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.79■□□□□ 0.921e-6■■■□□ 18.4
CLDND1-221ENST00000510541 DCP1AQ9NPI6 582 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-221ENST00000510541 FZD1Q9UP38 647 aa20.79■□□□□ 0.92
CLDND1-221ENST00000510541 CXCL11O14625 94 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 INPP5BP32019 993 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 GABPAQ06546 454 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 ZMYM1Q5SVZ6 1142 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 MAPKAPK5Q8IW41 473 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 LCORLQ8N3X6 602 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 ZIC5Q96T25 663 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
CLDND1-221ENST00000510541 SERPINB13Q9UIV8 391 aa20.78■□□□□ 0.92
CLDND1-221ENST00000510541 GJA5P36382 358 aa20.77■□□□□ 0.92
CLDND1-221ENST00000510541 CAP2P40123 477 aa20.77■□□□□ 0.92
CLDND1-221ENST00000510541 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
CLDND1-221ENST00000510541 ZKSCAN4Q969J2 545 aaPredicted RBP20.77■□□□□ 0.92
CLDND1-221ENST00000510541 OSBP2Q969R2 916 aa20.77■□□□□ 0.92
CLDND1-221ENST00000510541 PALD1Q9ULE6 856 aa20.77■□□□□ 0.92
CLDND1-221ENST00000510541 DOCK1Q14185 1865 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 MBD4O95243 580 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 PTPRAP18433 802 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 SBK1Q52WX2 424 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 OTUD7BQ6GQQ9 843 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 CENPQQ7L2Z9 268 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-221ENST00000510541 DDRGK1Q96HY6 314 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 FSD1Q9BTV5 496 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 ELP3Q9H9T3 547 aa20.76■□□□□ 0.91
CLDND1-221ENST00000510541 ASNSP08243 561 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 CETPP11597 493 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 SNAPC2Q13487 334 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 DNAJC18Q9H819 358 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 PICK1Q9NRD5 415 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 HELLSQ9NRZ9 838 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 SWAP70Q9UH65 585 aa20.75■□□□□ 0.91
CLDND1-221ENST00000510541 FOXN1O15353 648 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 GRM1Q13255 1194 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 IFNL1Q8IU54 200 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 NAV1Q8NEY1 1877 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 ARMT1Q9H993 441 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 RNF186Q9NXI6 227 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
CLDND1-221ENST00000510541 AFG3L2Q9Y4W6 797 aa20.74■□□□□ 0.91
CLDND1-221ENST00000510541 HIP1O00291 1037 aa20.73■□□□□ 0.91
CLDND1-221ENST00000510541 IRF6O14896 467 aa20.73■□□□□ 0.91
CLDND1-221ENST00000510541 GPAA1O43292 621 aa20.73■□□□□ 0.91
CLDND1-221ENST00000510541 C12orf60Q5U649 245 aa20.73■□□□□ 0.91
CLDND1-221ENST00000510541 WDR18Q9BV38 432 aa20.73■□□□□ 0.91
CLDND1-221ENST00000510541 MCM9Q9NXL9 1143 aa20.73■□□□□ 0.91
CLDND1-221ENST00000510541 GSG1L2A8MUP6 293 aa20.72■□□□□ 0.91
CLDND1-221ENST00000510541 PATL2C9JE40 543 aaKnown RBP20.72■□□□□ 0.91
CLDND1-221ENST00000510541 HSPA8P11142 646 aaKnown RBP20.72■□□□□ 0.91
CLDND1-221ENST00000510541 AMOTL1Q8IY63 956 aa20.72■□□□□ 0.91
CLDND1-221ENST00000510541 CRACR2BQ8N4Y2 399 aaPredicted RBP20.72■□□□□ 0.91
CLDND1-221ENST00000510541 OTUD5Q96G74 571 aa20.72■□□□□ 0.91
CLDND1-221ENST00000510541 SLC45A1Q9Y2W3 748 aa20.72■□□□□ 0.91
CLDND1-221ENST00000510541 SLC4A4Q9Y6R1 1079 aa20.72■□□□□ 0.91
CLDND1-221ENST00000510541 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
CLDND1-221ENST00000510541 PHIPQ8WWQ0 1821 aa20.71■□□□□ 0.91
CLDND1-221ENST00000510541 POLR3DP05423 398 aaPredicted RBP20.71■□□□□ 0.91
CLDND1-221ENST00000510541 PDE4AP27815 886 aa20.71■□□□□ 0.91
CLDND1-221ENST00000510541 PLCD1P51178 756 aa20.71■□□□□ 0.91
CLDND1-221ENST00000510541 SDR42E1Q8WUS8 393 aa20.71■□□□□ 0.91
CLDND1-221ENST00000510541 A0A0G2JLL6 359 aaPredicted RBP20.7■□□□□ 0.9
CLDND1-221ENST00000510541 USP17L5A8MUK1 530 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 ALX1Q15699 326 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 SLFNL1Q499Z3 407 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 SH3D19Q5HYK7 790 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 PRRT2Q7Z6L0 340 aaPredicted RBP20.7■□□□□ 0.9
CLDND1-221ENST00000510541 CCDC17Q96LX7 622 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 PTPN18Q99952 460 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 TRIM34Q9BYJ4 488 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
CLDND1-221ENST00000510541 PRKAB2O43741 272 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 CHGBP05060 677 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 NEFLP07196 543 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 MFAP1P55081 439 aaKnown RBP20.69■□□□□ 0.9
CLDND1-221ENST00000510541 MCMDC2Q4G0Z9 681 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 FASTKD5Q7L8L6 764 aaKnown RBP20.69■□□□□ 0.9
CLDND1-221ENST00000510541 ANKRD23Q86SG2 305 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 BRI3BPQ8WY22 251 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 NACAP1Q9BZK3 213 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 AS3MTQ9HBK9 375 aa20.69■□□□□ 0.9
CLDND1-221ENST00000510541 SAP30BPQ9UHR5 308 aaKnown RBP20.69■□□□□ 0.9
CLDND1-221ENST00000510541 USP17L12C9JPN9 530 aa20.68■□□□□ 0.9
CLDND1-221ENST00000510541 USP17L21D6R901 530 aa20.68■□□□□ 0.9
CLDND1-221ENST00000510541 IGF2BP3O00425 579 aaKnown RBP eCLIP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms