RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HCLS1P14317 486 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-206ENST00000509429 FRMD5Q7Z6J6 570 aa6.57□□□□□ -1.36
NIPBL-206ENST00000509429 ABTB2Q8N961 1025 aa6.57□□□□□ -1.36
NIPBL-206ENST00000509429 CNOT11Q9UKZ1 510 aaKnown RBP6.57□□□□□ -1.36
NIPBL-206ENST00000509429 MATN3O15232 486 aa6.56□□□□□ -1.36
NIPBL-206ENST00000509429 ZNF326Q5BKZ1 582 aaKnown RBP6.56□□□□□ -1.36
NIPBL-206ENST00000509429 ZNF605Q86T29 641 aa6.56□□□□□ -1.36
NIPBL-206ENST00000509429 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-206ENST00000509429 A0A096LPE4 126 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 A0A1W2PPZ6 126 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 SLC22A31A6NKX4 558 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 EREGO14944 169 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 LIG1P18858 919 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 AFF3P51826 1226 aaKnown RBP6.55□□□□□ -1.36
NIPBL-206ENST00000509429 ERVFC1P60507 584 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-206ENST00000509429 HSPA12BQ96MM6 686 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 MRIQ9BWK5 157 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 SLAMF8Q9P0V8 285 aa6.55□□□□□ -1.36
NIPBL-206ENST00000509429 HPXP02790 462 aa6.54□□□□□ -1.36
NIPBL-206ENST00000509429 PEAR1Q5VY43 1037 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-206ENST00000509429 SYT8Q8NBV8 401 aa6.54□□□□□ -1.36
NIPBL-206ENST00000509429 PANK1Q8TE04 598 aa6.54□□□□□ -1.36
NIPBL-206ENST00000509429 SGPP1Q9BX95 441 aa6.54□□□□□ -1.36
NIPBL-206ENST00000509429 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
NIPBL-206ENST00000509429 PI3P19957 117 aa6.53□□□□□ -1.36
NIPBL-206ENST00000509429 ZNF827Q17R98 1081 aa6.53□□□□□ -1.36
NIPBL-206ENST00000509429 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
NIPBL-206ENST00000509429 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
NIPBL-206ENST00000509429 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
NIPBL-206ENST00000509429 RNF32Q9H0A6 362 aa6.53□□□□□ -1.36
NIPBL-206ENST00000509429 SLC6A17Q9H1V8 727 aa6.53□□□□□ -1.36
NIPBL-206ENST00000509429 B3GALT4O96024 378 aa6.52□□□□□ -1.37
NIPBL-206ENST00000509429 CRB2Q5IJ48 1285 aa6.52□□□□□ -1.37
NIPBL-206ENST00000509429 ISL2Q96A47 359 aa6.52□□□□□ -1.37
NIPBL-206ENST00000509429 FOXQ1Q9C009 403 aa6.52□□□□□ -1.37
NIPBL-206ENST00000509429 LUC7LQ9NQ29 371 aaKnown RBP6.52□□□□□ -1.37
NIPBL-206ENST00000509429 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
NIPBL-206ENST00000509429 ZBTB7CA1YPR0 619 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 NEFMP07197 916 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 AP3B2Q13367 1082 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 FAM200AQ8TCP9 573 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 SCAND2PQ9GZW5 306 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-206ENST00000509429 GGNBP2Q9H3C7 697 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 ZNF552Q9H707 407 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-206ENST00000509429 LATS2Q9NRM7 1088 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 PCDHGC5Q9Y5F6 944 aa6.51□□□□□ -1.37
NIPBL-206ENST00000509429 K7ESM1 405 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 PCSK2P16519 638 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 NAA30Q147X3 362 aaPredicted RBP6.5□□□□□ -1.37
NIPBL-206ENST00000509429 RTP5Q14D33 572 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 TTC16Q8NEE8 873 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 SIGLEC10Q96LC7 697 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 POLR3GLQ9BT43 218 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 CCDC86Q9H6F5 360 aaKnown RBP6.5□□□□□ -1.37
NIPBL-206ENST00000509429 VRTNQ9H8Y1 702 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 TMEM59LQ9UK28 342 aa6.5□□□□□ -1.37
NIPBL-206ENST00000509429 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 A6NHS1 94 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 MAGEA10P43363 369 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-206ENST00000509429 HK2P52789 917 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 RALGPS1Q5JS13 557 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 DNAJC25Q9H1X3 360 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 IRAK3Q9Y616 596 aa6.49□□□□□ -1.37
NIPBL-206ENST00000509429 FAM155AB1AL88 458 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-206ENST00000509429 ZNF862O60290 1169 aa6.48□□□□□ -1.37
NIPBL-206ENST00000509429 PHACTR2O75167 634 aa6.48□□□□□ -1.37
NIPBL-206ENST00000509429 SPRED3Q2MJR0 410 aa6.48□□□□□ -1.37
NIPBL-206ENST00000509429 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
NIPBL-206ENST00000509429 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-206ENST00000509429 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
NIPBL-206ENST00000509429 H3BS24 57 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 PRICKLE3O43900 615 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-206ENST00000509429 SLPIP03973 132 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 TRHRP34981 398 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-206ENST00000509429 GRIA4P48058 902 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 VMACQ2NL98 169 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 CDKAL1Q5VV42 579 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 CAPN12Q6ZSI9 719 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 ATCAYQ86WG3 371 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 CCNJLQ8IV13 435 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 EDEM1Q92611 657 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
NIPBL-206ENST00000509429 PRMT3O60678 531 aa6.46□□□□□ -1.38
NIPBL-206ENST00000509429 CILPO75339 1184 aa6.46□□□□□ -1.38
NIPBL-206ENST00000509429 EOMESO95936 686 aa6.46□□□□□ -1.38
NIPBL-206ENST00000509429 GDF5P43026 501 aa6.46□□□□□ -1.38
NIPBL-206ENST00000509429 HNRNPUQ00839 825 aaKnown RBP eCLIP6.46□□□□□ -1.38
NIPBL-206ENST00000509429 OCLNQ16625 522 aa6.46□□□□□ -1.38
NIPBL-206ENST00000509429 A0A1W2PP55 124 aa6.45□□□□□ -1.38
NIPBL-206ENST00000509429 TGM1P22735 817 aa6.45□□□□□ -1.38
NIPBL-206ENST00000509429 ADAM17P78536 824 aa6.45□□□□□ -1.38
NIPBL-206ENST00000509429 THAP5Q7Z6K1 395 aa6.45□□□□□ -1.38
NIPBL-206ENST00000509429 TICAM2Q86XR7 235 aa6.45□□□□□ -1.38
NIPBL-206ENST00000509429 TNFRSF21O75509 655 aa6.44□□□□□ -1.38
NIPBL-206ENST00000509429 DNM1Q05193 864 aaKnown RBP6.44□□□□□ -1.38
NIPBL-206ENST00000509429 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
NIPBL-206ENST00000509429 MKNK1Q9BUB5 465 aa6.44□□□□□ -1.38
NIPBL-206ENST00000509429 SP110Q9HB58 689 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms