RNA–Protein interactions for RNA: ENST00000509055.1

AP3S1-206, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-206ENST00000509055 SLBPQ14493 270 aaKnown RBP eCLIP4.33□□□□□ -1.72
AP3S1-206ENST00000509055 WIPI1Q5MNZ9 446 aaPredicted RBP4.33□□□□□ -1.72
AP3S1-206ENST00000509055 HP1BP3Q5SSJ5 553 aaPredicted RBP4.33□□□□□ -1.72
AP3S1-206ENST00000509055 ZAR1Q86SH2 424 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 CCDC84Q86UT8 332 aaPredicted RBP4.33□□□□□ -1.72
AP3S1-206ENST00000509055 SMYD4Q8IYR2 804 aaPredicted RBP4.33□□□□□ -1.72
AP3S1-206ENST00000509055 GATAD2BQ8WXI9 593 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 ACSBG1Q96GR2 724 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 DBNDD2Q9BQY9 259 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 ATXN3LQ9H3M9 355 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 SAMM50Q9Y512 469 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 PCDHGB7Q9Y5F8 929 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 CORINQ9Y5Q5 1042 aa4.33□□□□□ -1.72
AP3S1-206ENST00000509055 PRR36Q9H6K5 1346 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 LEFTY1O75610 366 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 TGFB1P01137 390 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 HOXA10P31260 410 aaPredicted RBP4.32□□□□□ -1.72
AP3S1-206ENST00000509055 RPL6Q02878 288 aaKnown RBP4.32□□□□□ -1.72
AP3S1-206ENST00000509055 C9orf131Q5VYM1 1079 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 NFXL1Q6ZNB6 911 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 FAM196AQ6ZSG2 479 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 GOLM1Q8NBJ4 401 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 SHKBP1Q8TBC3 707 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 JARID2Q92833 1246 aaPredicted RBP4.32□□□□□ -1.72
AP3S1-206ENST00000509055 EAF1Q96JC9 268 aaPredicted RBP4.32□□□□□ -1.72
AP3S1-206ENST00000509055 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 WNT10AQ9GZT5 417 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 MIR1-1HGQ9H1L0 117 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 GOLGA2P5Q9HBQ8 144 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 GGT7Q9UJ14 662 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 DDX41Q9UJV9 622 aaKnown RBP4.32□□□□□ -1.72
AP3S1-206ENST00000509055 DAGLAQ9Y4D2 1042 aa4.32□□□□□ -1.72
AP3S1-206ENST00000509055 COL17A1Q9UMD9 1497 aaPredicted RBP4.31□□□□□ -1.72
AP3S1-206ENST00000509055 FANCGO15287 622 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 RLBP1P12271 317 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 GRK4P32298 578 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 ZNF76P36508 570 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 EIF4A3P38919 411 aaKnown RBP4.31□□□□□ -1.72
AP3S1-206ENST00000509055 NFKBIBQ15653 356 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 ZNF765Q7L2R6 523 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 HS2ST1Q7LGA3 356 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 WFDC3Q8IUB2 231 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 RIN3Q8TB24 985 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 ZNF296Q8WUU4 475 aaPredicted RBP4.31□□□□□ -1.72
AP3S1-206ENST00000509055 ACSF2Q96CM8 615 aaPredicted RBP4.31□□□□□ -1.72
AP3S1-206ENST00000509055 HEXIM2Q96MH2 286 aaKnown RBP4.31□□□□□ -1.72
AP3S1-206ENST00000509055 DUSP23Q9BVJ7 150 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 LRRC3Q9BY71 257 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 METTL5Q9NRN9 209 aaKnown RBP4.31□□□□□ -1.72
AP3S1-206ENST00000509055 UBP1Q9NZI7 540 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 TJP2Q9UDY2 1190 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 SNCAIPQ9Y6H5 919 aa4.31□□□□□ -1.72
AP3S1-206ENST00000509055 PRAMEF27A3QJZ7 478 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 WDR64B1ANS9 1081 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 SCAMP3O14828 347 aaKnown RBP4.3□□□□□ -1.72
AP3S1-206ENST00000509055 EOMESO95936 686 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 RXRBP28702 533 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 CAP2P40123 477 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 CD97P48960 835 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 RELL1Q8IUW5 271 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 FBXL6Q8N531 539 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 PCOLCE2Q9UKZ9 415 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 RNF112Q9ULX5 631 aa4.3□□□□□ -1.72
AP3S1-206ENST00000509055 TLR3O15455 904 aaKnown RBP4.29□□□□□ -1.72
AP3S1-206ENST00000509055 GRIN3BO60391 1043 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 RNGTTO60942 597 aaKnown RBP4.29□□□□□ -1.72
AP3S1-206ENST00000509055 SLITRK5O94991 958 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 MAP7Q14244 749 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 OGFOD3Q6PK18 319 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 PAOXQ6QHF9 649 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 HDXQ7Z353 690 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 REC114Q7Z4M0 266 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 SLC51AQ86UW1 340 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 PPP1R13LQ8WUF5 828 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 ELMO3Q96BJ8 720 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 TBC1D32Q96NH3 1257 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 TACC3Q9Y6A5 838 aa4.29□□□□□ -1.72
AP3S1-206ENST00000509055 KIAA1324LA8MWY0 1029 aaPredicted RBP4.28□□□□□ -1.72
AP3S1-206ENST00000509055 UPK3BL1B0FP48 263 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 UPK3BL2E5RIL1 263 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 FAM87AP0C7U9 286 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 PWP1Q13610 501 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 MPP2Q14168 576 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 TMEM201Q5SNT2 666 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 ARMCX6Q7L4S7 300 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 USP48Q86UV5 1035 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 NT5DC4Q86YG4 428 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 SLITRK4Q8IW52 837 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
AP3S1-206ENST00000509055 MRPL41Q8IXM3 137 aaKnown RBP4.28□□□□□ -1.72
AP3S1-206ENST00000509055 RNF34Q969K3 372 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 DPH2Q9BQC3 489 aaPredicted RBP4.28□□□□□ -1.72
AP3S1-206ENST00000509055 NT5C1AQ9BXI3 368 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 PIDD1Q9HB75 910 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 BRMS1Q9HCU9 246 aa4.28□□□□□ -1.72
AP3S1-206ENST00000509055 GSC2O15499 205 aa4.27□□□□□ -1.73
AP3S1-206ENST00000509055 HYAL3O43820 417 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms