RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 METTL16Q86W50 562 aaKnown RBP28.44■■■□□ 2.14
CSNK1G3-204ENST00000508708 DNAJC18Q9H819 358 aa28.44■■■□□ 2.14
CSNK1G3-204ENST00000508708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.44■■■□□ 2.14
CSNK1G3-204ENST00000508708 PI4KBQ9UBF8 816 aa28.44■■■□□ 2.14
CSNK1G3-204ENST00000508708 BTBD19C9JJ37 291 aa28.43■■■□□ 2.14
CSNK1G3-204ENST00000508708 RRP1BQ14684 758 aaKnown RBP28.43■■■□□ 2.14
CSNK1G3-204ENST00000508708 ZCCHC17Q9NP64 241 aaKnown RBP28.43■■■□□ 2.14
CSNK1G3-204ENST00000508708 HERC5Q9UII4 1024 aaKnown RBP28.43■■■□□ 2.14
CSNK1G3-204ENST00000508708 PTPRFP10586 1907 aa28.43■■■□□ 2.14
CSNK1G3-204ENST00000508708 ZNF532Q9HCE3 1301 aa28.43■■■□□ 2.14
CSNK1G3-204ENST00000508708 HTTP42858 3142 aa28.42■■■□□ 2.14
CSNK1G3-204ENST00000508708 ATAD5Q96QE3 1844 aa28.42■■■□□ 2.14
CSNK1G3-204ENST00000508708 PICK1Q9NRD5 415 aa28.42■■■□□ 2.14
CSNK1G3-204ENST00000508708 ECHDC1Q9NTX5 307 aa28.42■■■□□ 2.14
CSNK1G3-204ENST00000508708 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.42■■■□□ 2.14
CSNK1G3-204ENST00000508708 PALD1Q9ULE6 856 aa28.42■■■□□ 2.14
CSNK1G3-204ENST00000508708 ZHX2Q9Y6X8 837 aa28.41■■■□□ 2.14
CSNK1G3-204ENST00000508708 MYH1P12882 1939 aa28.41■■■□□ 2.14
CSNK1G3-204ENST00000508708 MYH7P12883 1935 aa28.41■■■□□ 2.14
CSNK1G3-204ENST00000508708 CXCL11O14625 94 aa28.4■■■□□ 2.14
CSNK1G3-204ENST00000508708 ADD2P35612 726 aa28.4■■■□□ 2.14
CSNK1G3-204ENST00000508708 TAF1CQ15572 869 aaPredicted RBP28.4■■■□□ 2.14
CSNK1G3-204ENST00000508708 SAP30BPQ9UHR5 308 aaKnown RBP28.4■■■□□ 2.14
CSNK1G3-204ENST00000508708 AFG3L2Q9Y4W6 797 aa28.4■■■□□ 2.14
CSNK1G3-204ENST00000508708 MAGEB6P1A0A0J9YX57 407 aa28.39■■■□□ 2.14
CSNK1G3-204ENST00000508708 CCDC84Q86UT8 332 aaPredicted RBP28.39■■■□□ 2.14
CSNK1G3-204ENST00000508708 NAV1Q8NEY1 1877 aa28.39■■■□□ 2.14
CSNK1G3-204ENST00000508708 A0A0G2JLL6 359 aaPredicted RBP28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 CAP2P40123 477 aa28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 HDAC1Q13547 482 aaPredicted RBP28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 SLFNL1Q499Z3 407 aa28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 TSHZ3Q63HK5 1081 aa28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 PRRT2Q7Z6L0 340 aaPredicted RBP28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 ANKRD23Q86SG2 305 aa28.38■■■□□ 2.13
CSNK1G3-204ENST00000508708 CHGBP05060 677 aa28.37■■■□□ 2.13
CSNK1G3-204ENST00000508708 USP5P45974 858 aa28.37■■■□□ 2.13
CSNK1G3-204ENST00000508708 ZFYVE28Q9HCC9 887 aa28.37■■■□□ 2.13
CSNK1G3-204ENST00000508708 CAP1Q01518 475 aa28.36■■■□□ 2.13
CSNK1G3-204ENST00000508708 AAMPQ13685 434 aa28.36■■■□□ 2.13
CSNK1G3-204ENST00000508708 GPAT2Q6NUI2 795 aa28.36■■■□□ 2.13
CSNK1G3-204ENST00000508708 FOXP4Q8IVH2 680 aaPredicted RBP28.36■■■□□ 2.13
CSNK1G3-204ENST00000508708 LCORLQ8N3X6 602 aa28.36■■■□□ 2.13
CSNK1G3-204ENST00000508708 OTUD7AQ8TE49 926 aaPredicted RBP28.36■■■□□ 2.13
CSNK1G3-204ENST00000508708 HLA-DOAP06340 250 aa28.35■■■□□ 2.13
CSNK1G3-204ENST00000508708 SLC4A8Q2Y0W8 1093 aa28.35■■■□□ 2.13
CSNK1G3-204ENST00000508708 GPATCH3Q96I76 525 aa28.35■■■□□ 2.13
CSNK1G3-204ENST00000508708 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.35■■■□□ 2.13
CSNK1G3-204ENST00000508708 ADGRA2Q96PE1 1338 aa28.35■■■□□ 2.13
CSNK1G3-204ENST00000508708 SALL3Q9BXA9 1300 aa28.35■■■□□ 2.13
CSNK1G3-204ENST00000508708 TLR2O60603 784 aa28.34■■■□□ 2.13
CSNK1G3-204ENST00000508708 JAG1P78504 1218 aa28.34■■■□□ 2.13
CSNK1G3-204ENST00000508708 UBE3CQ15386 1083 aa28.34■■■□□ 2.13
CSNK1G3-204ENST00000508708 EHD4Q9H223 541 aa28.34■■■□□ 2.13
CSNK1G3-204ENST00000508708 LOC285556D6RIA3 1793 aa28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 PDHXO00330 501 aa28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 SP3Q02447 781 aa28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 PKN2Q16513 984 aaKnown RBP28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 CRACR2BQ8N4Y2 399 aaPredicted RBP28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 PI4K2BQ8TCG2 481 aa28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 CRNKL1Q9BZJ0 848 aaKnown RBP28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 TTC41PQ6P2S7 1318 aa28.33■■■□□ 2.13
CSNK1G3-204ENST00000508708 TRIM75PA6NK02 468 aa28.32■■■□□ 2.12
CSNK1G3-204ENST00000508708 SHROOM1Q2M3G4 852 aaPredicted RBP28.32■■■□□ 2.12
CSNK1G3-204ENST00000508708 CD99L2Q8TCZ2 262 aa28.32■■■□□ 2.12
CSNK1G3-204ENST00000508708 SDR42E1Q8WUS8 393 aa28.32■■■□□ 2.12
CSNK1G3-204ENST00000508708 ERO1AQ96HE7 468 aa28.32■■■□□ 2.12
CSNK1G3-204ENST00000508708 ARMT1Q9H993 441 aa28.32■■■□□ 2.12
CSNK1G3-204ENST00000508708 MBD4O95243 580 aa28.31■■■□□ 2.12
CSNK1G3-204ENST00000508708 OTOP1Q7RTM1 612 aa28.31■■■□□ 2.12
CSNK1G3-204ENST00000508708 KBTBD3Q8NAB2 608 aa28.31■■■□□ 2.12
CSNK1G3-204ENST00000508708 GCC1Q96CN9 775 aa28.31■■■□□ 2.12
CSNK1G3-204ENST00000508708 TBC1D2Q9BYX2 928 aa28.31■■■□□ 2.12
CSNK1G3-204ENST00000508708 DCP1AQ9NPI6 582 aaPredicted RBP28.31■■■□□ 2.12
CSNK1G3-204ENST00000508708 PLCD1P51178 756 aa28.3■■■□□ 2.12
CSNK1G3-204ENST00000508708 TATDN1Q6P1N9 297 aa28.3■■■□□ 2.12
CSNK1G3-204ENST00000508708 FASTKD5Q7L8L6 764 aaKnown RBP28.3■■■□□ 2.12
CSNK1G3-204ENST00000508708 ZNF280CQ8ND82 737 aa28.3■■■□□ 2.12
CSNK1G3-204ENST00000508708 EXOC6Q8TAG9 804 aa28.3■■■□□ 2.12
CSNK1G3-204ENST00000508708 SERPINB13Q9UIV8 391 aa28.3■■■□□ 2.12
CSNK1G3-204ENST00000508708 USP17L5A8MUK1 530 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 GDF11O95390 407 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 ASNSP08243 561 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 EVX2Q03828 476 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 FBXO46Q6PJ61 603 aaPredicted RBP28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 C17orf99Q6UX52 265 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 TTC6Q86TZ1 520 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 TRIM34Q9BYJ4 488 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 GINM1Q9NU53 330 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 ZBTB21Q9ULJ3 1066 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 HPS5Q9UPZ3 1129 aa28.29■■■□□ 2.12
CSNK1G3-204ENST00000508708 ZSWIM8A7E2V4 1837 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 GABPAQ06546 454 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 SPP2Q13103 211 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 ZSCAN25Q6NSZ9 544 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 PUS7LQ9H0K6 701 aaKnown RBP28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 SLC45A1Q9Y2W3 748 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 TRIM17Q9Y577 477 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 SUPT16HQ9Y5B9 1047 aaKnown RBP28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 CENPFP49454 3210 aa28.28■■■□□ 2.12
CSNK1G3-204ENST00000508708 CCDC85CA6NKD9 419 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms