RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 APOA5Q6Q788 366 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 MICU3Q86XE3 530 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 SMAP1Q8IYB5 467 aaPredicted RBP12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 MYL10Q9BUA6 226 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 EVX2Q03828 476 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 CCAR1Q8IX12 1150 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 CPLX1O14810 134 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 CTIFO43310 598 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 METAP2P50579 478 aaKnown RBP eCLIP12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 GRIK5Q16478 980 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 NFXL1Q6ZNB6 911 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 TMEM87BQ96K49 555 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 KRT23Q9C075 422 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 CLIP2Q9UDT6 1046 aa12.76□□□□□ -0.37
SH3RF1-203ENST00000508685 MYH15Q9Y2K3 1946 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 IFIT3O14879 490 aaKnown RBP12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 CDC27P30260 824 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 HOXA10P31260 410 aaPredicted RBP12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 IQCB1Q15051 598 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 ZNF804AQ7Z570 1209 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 DZIP1Q86YF9 867 aaKnown RBP12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 C17orf53Q8N3J3 647 aaPredicted RBP12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 DNAJC25Q9H1X3 360 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 MAST2Q6P0Q8 1798 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 UTRNP46939 3433 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
SH3RF1-203ENST00000508685 SMTNL1A8MU46 457 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 BECN2A8MW95 431 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 SLC16A10Q8TF71 515 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 BRIP1Q9BX63 1249 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 POLLQ9UGP5 575 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 GGA1Q9UJY5 639 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 ZBTB43O43298 467 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 PRDM1O75626 825 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 BBOX1O75936 387 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 LIFRP42702 1097 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 CTR9Q6PD62 1173 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 OLFM4Q6UX06 510 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 FTOQ9C0B1 505 aaKnown RBP eCLIP12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 RTEL1Q9NZ71 1219 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 ORC3Q9UBD5 711 aaPredicted RBP12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 ANAPC4Q9UJX5 808 aa12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
SH3RF1-203ENST00000508685 USP17L12C9JPN9 530 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 USP17L21D6R901 530 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 LDHBP07195 334 aaKnown RBP12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 MMP10P09238 476 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 SLC4A8Q2Y0W8 1093 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 ADALQ6DHV7 355 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 PHKBQ93100 1093 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 AIFM3Q96NN9 605 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 CRAMP1Q96RY5 1269 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 DCP1AQ9NPI6 582 aaPredicted RBP12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 SLC12A7Q9Y666 1083 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 DUOX1Q9NRD9 1551 aa12.73□□□□□ -0.37
SH3RF1-203ENST00000508685 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 C15orf52Q6ZUT6 534 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 CD209Q9NNX6 404 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms