RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 CCDC38Q502W7 563 aa5.88□□□□□ -1.47
APC-208ENST00000508624 SPATA1Q5VX52 437 aa5.88□□□□□ -1.47
APC-208ENST00000508624 MYCBPQ99417 103 aaPredicted RBP5.88□□□□□ -1.47
APC-208ENST00000508624 DDX41Q9UJV9 622 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 HLA-DOAP06340 250 aa5.88□□□□□ -1.47
APC-208ENST00000508624 ZC3H6P61129 1189 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 ATP11AP98196 1134 aa5.88□□□□□ -1.47
APC-208ENST00000508624 ATP2B2Q01814 1243 aa5.88□□□□□ -1.47
APC-208ENST00000508624 SV2BQ7L1I2 683 aa5.88□□□□□ -1.47
APC-208ENST00000508624 FBF1Q8TES7 1133 aa5.88□□□□□ -1.47
APC-208ENST00000508624 PPP1R13BQ96KQ4 1090 aa5.88□□□□□ -1.47
APC-208ENST00000508624 RAB17Q9H0T7 212 aa5.88□□□□□ -1.47
APC-208ENST00000508624 TMX1Q9H3N1 280 aa5.88□□□□□ -1.47
APC-208ENST00000508624 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
APC-208ENST00000508624 IKBKGQ9Y6K9 419 aa5.88□□□□□ -1.47
APC-208ENST00000508624 A0A1W2PRG0 241 aa5.88□□□□□ -1.47
APC-208ENST00000508624 ATP5J2-PTCD1G3V325 749 aa5.88□□□□□ -1.47
APC-208ENST00000508624 POLR2DO15514 142 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 PTCD1O75127 700 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 ACTN2P35609 894 aa5.88□□□□□ -1.47
APC-208ENST00000508624 MATR3P43243 847 aaKnown RBP eCLIP5.88□□□□□ -1.47
APC-208ENST00000508624 LMNTD2Q8IXW0 634 aa5.88□□□□□ -1.47
APC-208ENST00000508624 MAIP1Q8WWC4 291 aa5.88□□□□□ -1.47
APC-208ENST00000508624 RRP36Q96EU6 259 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 TACO1Q9BSH4 297 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 STIM2Q9P246 746 aa5.88□□□□□ -1.47
APC-208ENST00000508624 PXDNLA1KZ92 1463 aa5.88□□□□□ -1.47
APC-208ENST00000508624 LMTK2Q8IWU2 1503 aa5.88□□□□□ -1.47
APC-208ENST00000508624 CYP2E1P05181 493 aaPredicted RBP5.88□□□□□ -1.47
APC-208ENST00000508624 TRAPPC10P48553 1259 aa5.88□□□□□ -1.47
APC-208ENST00000508624 NBPF14Q5TI25 921 aa5.88□□□□□ -1.47
APC-208ENST00000508624 HS2ST1Q7LGA3 356 aa5.88□□□□□ -1.47
APC-208ENST00000508624 SNRKQ9NRH2 765 aa5.88□□□□□ -1.47
APC-208ENST00000508624 UTP11Q9Y3A2 253 aaKnown RBP5.88□□□□□ -1.47
APC-208ENST00000508624 SH3TC1Q8TE82 1336 aa5.88□□□□□ -1.47
APC-208ENST00000508624 USP32Q8NFA0 1604 aa5.88□□□□□ -1.47
APC-208ENST00000508624 E7EWF7 191 aa5.87□□□□□ -1.47
APC-208ENST00000508624 EIF4A1P60842 406 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 CALCOCO2Q13137 446 aa5.87□□□□□ -1.47
APC-208ENST00000508624 GCKRQ14397 625 aa5.87□□□□□ -1.47
APC-208ENST00000508624 CCDC6Q16204 474 aa5.87□□□□□ -1.47
APC-208ENST00000508624 TCERG1LQ5VWI1 586 aa5.87□□□□□ -1.47
APC-208ENST00000508624 KRT40Q6A162 431 aa5.87□□□□□ -1.47
APC-208ENST00000508624 CCDC144CPQ8IYA2 1237 aa5.87□□□□□ -1.47
APC-208ENST00000508624 STK11IPQ8N1F8 1099 aa5.87□□□□□ -1.47
APC-208ENST00000508624 FAM227BQ96M60 508 aa5.87□□□□□ -1.47
APC-208ENST00000508624 NOC4LQ9BVI4 516 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 ZBTB3Q9H5J0 574 aa5.87□□□□□ -1.47
APC-208ENST00000508624 WDR19Q8NEZ3 1342 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PFKFB1P16118 471 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PRPF4BQ13523 1007 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 ERCC6LQ2NKX8 1250 aa5.87□□□□□ -1.47
APC-208ENST00000508624 DIS3L2Q8IYB7 885 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 CCDC82Q8N4S0 544 aa5.87□□□□□ -1.47
APC-208ENST00000508624 FBXO18Q8NFZ0 1043 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ZCRB1Q8TBF4 217 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 RUNDC3BQ96NL0 473 aa5.87□□□□□ -1.47
APC-208ENST00000508624 GSDMAQ96QA5 445 aa5.87□□□□□ -1.47
APC-208ENST00000508624 FEZ2Q9UHY8 353 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 TPCN1Q9ULQ1 816 aa5.87□□□□□ -1.47
APC-208ENST00000508624 CEP83Q9Y592 693 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ADGRB3O60242 1522 aa5.87□□□□□ -1.47
APC-208ENST00000508624 TTC38Q5R3I4 469 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PANX2Q96RD6 677 aa5.87□□□□□ -1.47
APC-208ENST00000508624 OSBPL5Q9H0X9 879 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 PRM3Q9NNZ6 103 aa5.87□□□□□ -1.47
APC-208ENST00000508624 CTNND2Q9UQB3 1225 aa5.87□□□□□ -1.47
APC-208ENST00000508624 HYOU1Q9Y4L1 999 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PCDH11XQ9BZA7 1347 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PCDH11YQ9BZA8 1340 aa5.87□□□□□ -1.47
APC-208ENST00000508624 RASSF2P50749 326 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 ZNF790Q6PG37 636 aa5.87□□□□□ -1.47
APC-208ENST00000508624 KRT25Q7Z3Z0 450 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ARHGAP24Q8N264 748 aa5.87□□□□□ -1.47
APC-208ENST00000508624 NKIRAS1Q9NYS0 192 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PYCARDQ9ULZ3 195 aa5.87□□□□□ -1.47
APC-208ENST00000508624 GPAA1O43292 621 aa5.87□□□□□ -1.47
APC-208ENST00000508624 TSPY3P0CV98 308 aa5.87□□□□□ -1.47
APC-208ENST00000508624 TSPY8P0CW00 308 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ATP2A2P16615 1042 aaKnown RBP5.87□□□□□ -1.47
APC-208ENST00000508624 NAPAP54920 295 aa5.87□□□□□ -1.47
APC-208ENST00000508624 MTX1Q13505 466 aa5.87□□□□□ -1.47
APC-208ENST00000508624 SLC39A14Q15043 492 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PNPLA6Q8IY17 1366 aa5.87□□□□□ -1.47
APC-208ENST00000508624 FNBP4Q8N3X1 1017 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 PPFIBP2Q8ND30 876 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ANKRD2Q9GZV1 360 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ATG3Q9NT62 314 aa5.87□□□□□ -1.47
APC-208ENST00000508624 DENND2AQ9ULE3 1009 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PALD1Q9ULE6 856 aa5.87□□□□□ -1.47
APC-208ENST00000508624 MORC2Q9Y6X9 1032 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 A0A087WUV0 522 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 NUTM2BA6NNL0 878 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 NUTM2EB1AL46 878 aaPredicted RBP5.87□□□□□ -1.47
APC-208ENST00000508624 CIAO1O76071 339 aa5.87□□□□□ -1.47
APC-208ENST00000508624 ATP6V1AP38606 617 aa5.87□□□□□ -1.47
APC-208ENST00000508624 SLMAPQ14BN4 828 aa5.87□□□□□ -1.47
APC-208ENST00000508624 KRT24Q2M2I5 525 aa5.87□□□□□ -1.47
APC-208ENST00000508624 PARP10Q53GL7 1025 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms