RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 PLCD1P51178 756 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 FGD1P98174 961 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 USP48Q86UV5 1035 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 FOXP4Q8IVH2 680 aaPredicted RBP13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 NCOA7Q8NI08 942 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 DYNLL2Q96FJ2 89 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 KRT23Q9C075 422 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 NAV1Q8NEY1 1877 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
BRCC3P1-201ENST00000508559 UTRNP46939 3433 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 RANBP6O60518 1105 aaKnown RBP13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 HMGB1P09429 215 aaKnown RBP13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 YY1P25490 414 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 STAG1Q8WVM7 1258 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 ESR2Q92731 530 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 NEK1Q96PY6 1258 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
BRCC3P1-201ENST00000508559 BAZ2AQ9UIF9 1905 aaKnown RBP13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 ADM5C9JUS6 153 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 PRDM1O75626 825 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 CDK8P49336 464 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 SH3BP5LQ7L8J4 393 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 EHD4Q9H223 541 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 MYH1P12882 1939 aa13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 COL2A1P02458 1487 aaPredicted RBP13.03□□□□□ -0.32
BRCC3P1-201ENST00000508559 ERICH2A1L162 156 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 B4E1Z4 1266 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 RABEP1Q15276 862 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 NBPF12Q5TAG4 269 aaPredicted RBP13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 MAP1SQ66K74 1059 aaPredicted RBP13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 MIGA2Q7L4E1 593 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 KCNB2Q92953 911 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 GLIS2Q9BZE0 524 aaPredicted RBP13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 INCENPQ9NQS7 918 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 ATRNL1Q5VV63 1379 aa13.02□□□□□ -0.33
BRCC3P1-201ENST00000508559 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 ORC4O43929 436 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 KDM4AO75164 1064 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 MCM5P33992 734 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 NEK4P51957 841 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 EVX2Q03828 476 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 ADCK5Q3MIX3 580 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 UBAC1Q9BSL1 405 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 PGAP2Q9UHJ9 254 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 TAF6LQ9Y6J9 622 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 NEDD4P46934 1319 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 ROBO3Q96MS0 1386 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 CDK5RAP2Q96SN8 1893 aa13.01□□□□□ -0.33
BRCC3P1-201ENST00000508559 FOCADQ5VW36 1801 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 SMIM22K7EJ46 135 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 PRC1O43663 620 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
BRCC3P1-201ENST00000508559 ST18O60284 1047 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 NT5C2P49902 561 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 TFAP4Q01664 338 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 PRKG1Q13976 671 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 CHADLQ6NUI6 762 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 IQCA1Q86XH1 822 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 CDCA5Q96FF9 252 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 CCDC17Q96LX7 622 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZNF341Q9BYN7 854 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZNF408Q9H9D4 720 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
BRCC3P1-201ENST00000508559 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms