RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 MCMDC2Q4G0Z9 681 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 ANKRD36CQ5JPF3 1778 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 GORABQ5T7V8 394 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 C15orf52Q6ZUT6 534 aaKnown RBP9.69□□□□□ -0.86
CCSER1-207ENST00000508550 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 NEUROD6Q96NK8 337 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 FSD1Q9BTV5 496 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
CCSER1-207ENST00000508550 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCSER1-207ENST00000508550 LSG1Q9H089 658 aaKnown RBP9.69□□□□□ -0.86
CCSER1-207ENST00000508550 ALDH8A1Q9H2A2 487 aaPredicted RBP9.69□□□□□ -0.86
CCSER1-207ENST00000508550 PAG1Q9NWQ8 432 aa9.69□□□□□ -0.86
CCSER1-207ENST00000508550 TLR7Q9NYK1 1049 aaKnown RBP9.69□□□□□ -0.86
CCSER1-207ENST00000508550 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 MED23Q9ULK4 1368 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 AP1G2O75843 785 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 BBOX1O75936 387 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 HOXA10P31260 410 aaPredicted RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 NT5C2P49902 561 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 RPS8P62241 208 aaKnown RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 ST5P78524 1137 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 KRT32Q14532 448 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 TTC39AQ5SRH9 613 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 DDX46Q7L014 1031 aaKnown RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 SYNE4Q8N205 404 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 ZNF594Q96JF6 807 aaPredicted RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 DSCC1Q9BVC3 393 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 GOPCQ9HD26 462 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 ANO2Q9NQ90 1003 aa9.68□□□□□ -0.86
CCSER1-207ENST00000508550 GNL3LQ9NVN8 582 aaKnown RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 AFDNP55196 1824 aaKnown RBP9.68□□□□□ -0.86
CCSER1-207ENST00000508550 SCN7AQ01118 1682 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 ZNF804BA4D1E1 1349 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 K7ELQ4 463 aaPredicted RBP9.67□□□□□ -0.86
CCSER1-207ENST00000508550 RNF113AO15541 343 aaKnown RBP9.67□□□□□ -0.86
CCSER1-207ENST00000508550 SPINT1O43278 529 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 APBA3O96018 575 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 PSMA5P28066 241 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 NFIXQ14938 502 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 NECTIN1Q15223 517 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 UBE3CQ15386 1083 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.67□□□□□ -0.86
CCSER1-207ENST00000508550 CNBD1Q8NA66 436 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 CWC22Q9HCG8 908 aaKnown RBP9.67□□□□□ -0.86
CCSER1-207ENST00000508550 RGS17Q9UGC6 210 aaPredicted RBP9.67□□□□□ -0.86
CCSER1-207ENST00000508550 LEMD3Q9Y2U8 911 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 SPEF2Q9C093 1822 aa9.67□□□□□ -0.86
CCSER1-207ENST00000508550 RPAP1Q9BWH6 1393 aaPredicted RBP9.66□□□□□ -0.86
CCSER1-207ENST00000508550 NUP98P52948 1817 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 SBF2Q86WG5 1849 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 RGPD3A6NKT7 1758 aaPredicted RBP9.66□□□□□ -0.86
CCSER1-207ENST00000508550 RGPD4Q7Z3J3 1758 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 HMGB1P09429 215 aaKnown RBP9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CHRNDQ07001 517 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CBLBQ13191 982 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 GRAPQ13588 217 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 ZMYM1Q5SVZ6 1142 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 FAM182BQ5T319 152 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CCDC102BQ68D86 513 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CWC27Q6UX04 472 aaKnown RBP9.66□□□□□ -0.86
CCSER1-207ENST00000508550 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 FBXL16Q8N461 479 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 GRAPLQ8TC17 118 aaPredicted RBP9.66□□□□□ -0.86
CCSER1-207ENST00000508550 ADAM32Q8TC27 787 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 EPS8L1Q8TE68 723 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 INTS4Q96HW7 963 aaKnown RBP9.66□□□□□ -0.86
CCSER1-207ENST00000508550 CRAMP1Q96RY5 1269 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 BRIP1Q9BX63 1249 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 MINPP1Q9UNW1 487 aa9.66□□□□□ -0.86
CCSER1-207ENST00000508550 TAF5LO75529 589 aa9.65□□□□□ -0.86
CCSER1-207ENST00000508550 ANKRD1Q15327 319 aa9.65□□□□□ -0.86
CCSER1-207ENST00000508550 INTS6LQ5JSJ4 861 aaKnown RBP9.65□□□□□ -0.86
CCSER1-207ENST00000508550 APPBP2Q92624 585 aa9.65□□□□□ -0.86
CCSER1-207ENST00000508550 RBM17Q96I25 401 aaKnown RBP9.65□□□□□ -0.86
CCSER1-207ENST00000508550 PODXL2Q9NZ53 605 aa9.65□□□□□ -0.86
CCSER1-207ENST00000508550 TFCP2L1Q9NZI6 479 aa9.65□□□□□ -0.86
CCSER1-207ENST00000508550 SRP68Q9UHB9 627 aaKnown RBP9.65□□□□□ -0.86
CCSER1-207ENST00000508550 CTNNA3Q9UI47 895 aa9.65□□□□□ -0.86
CCSER1-207ENST00000508550 EP400Q96L91 3159 aa9.65□□□□□ -0.87
CCSER1-207ENST00000508550 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.87
CCSER1-207ENST00000508550 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
CCSER1-207ENST00000508550 POLRMTO00411 1230 aaKnown RBP9.64□□□□□ -0.87
CCSER1-207ENST00000508550 SERPINB2P05120 415 aa9.64□□□□□ -0.87
CCSER1-207ENST00000508550 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
CCSER1-207ENST00000508550 NMIQ13287 307 aaPredicted RBP9.64□□□□□ -0.87
CCSER1-207ENST00000508550 VPS53Q5VIR6 699 aa9.64□□□□□ -0.87
CCSER1-207ENST00000508550 PRR5LQ6MZQ0 368 aa9.64□□□□□ -0.87
CCSER1-207ENST00000508550 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
CCSER1-207ENST00000508550 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms