RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.6□□□□□ -1.19
USO1-202ENST00000508454 POU5F2Q8N7G0 328 aa7.6□□□□□ -1.19
USO1-202ENST00000508454 CBX8Q9HC52 389 aa7.6□□□□□ -1.19
USO1-202ENST00000508454 VAV3Q9UKW4 847 aa7.6□□□□□ -1.19
USO1-202ENST00000508454 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
USO1-202ENST00000508454 C12orf40Q86WS4 652 aa7.59□□□□□ -1.19
USO1-202ENST00000508454 ASIC4Q96FT7 647 aa7.59□□□□□ -1.19
USO1-202ENST00000508454 SRCIN1Q9C0H9 1055 aa7.59□□□□□ -1.19
USO1-202ENST00000508454 IGSF5Q9NSI5 407 aa7.59□□□□□ -1.19
USO1-202ENST00000508454 SHROOM4Q9ULL8 1493 aa7.59□□□□□ -1.19
USO1-202ENST00000508454 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
USO1-202ENST00000508454 LRRN4CLQ8ND94 238 aa7.58□□□□□ -1.2
USO1-202ENST00000508454 ACSBG1Q96GR2 724 aa7.58□□□□□ -1.2
USO1-202ENST00000508454 ARID1BQ8NFD5 2236 aaPredicted RBP7.58□□□□□ -1.2
USO1-202ENST00000508454 EOMESO95936 686 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 ITIH2P19823 946 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 AOC3Q16853 763 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 SPACA3Q8IXA5 215 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 GAL3ST3Q96A11 431 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 CEP44Q9C0F1 390 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
USO1-202ENST00000508454 C8AP07357 584 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 HNRNPUQ00839 825 aaKnown RBP eCLIP7.56□□□□□ -1.2
USO1-202ENST00000508454 INPP5AQ14642 412 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 NKPD1Q17RQ9 610 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 ALG1LQ6GMV1 187 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 FBRSQ9HAH7 460 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 SSU72Q9NP77 194 aaKnown RBP7.56□□□□□ -1.2
USO1-202ENST00000508454 PRDM10Q9NQV6 1147 aa7.56□□□□□ -1.2
USO1-202ENST00000508454 CNTNAP4Q9C0A0 1308 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 FANCGO15287 622 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 USP17L7P0C7H9 530 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 CDK8P49336 464 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 JAG1P78504 1218 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
USO1-202ENST00000508454 ATG4DQ86TL0 474 aaPredicted RBP7.55□□□□□ -1.2
USO1-202ENST00000508454 ZSCAN29Q8IWY8 852 aaPredicted RBP7.55□□□□□ -1.2
USO1-202ENST00000508454 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
USO1-202ENST00000508454 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
USO1-202ENST00000508454 TMEM265A0A087WTH1 108 aa7.54□□□□□ -1.2
USO1-202ENST00000508454 RBM47A0AV96 593 aaKnown RBP7.54□□□□□ -1.2
USO1-202ENST00000508454 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
USO1-202ENST00000508454 GIPC1O14908 333 aa7.54□□□□□ -1.2
USO1-202ENST00000508454 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
USO1-202ENST00000508454 DNAJC14Q6Y2X3 702 aaPredicted RBP7.54□□□□□ -1.2
USO1-202ENST00000508454 CYFIP1Q7L576 1253 aa7.54□□□□□ -1.2
USO1-202ENST00000508454 PRDM7Q9NQW5 492 aa7.54□□□□□ -1.2
USO1-202ENST00000508454 KIAA1522Q9P206 1035 aaPredicted RBP7.54□□□□□ -1.2
USO1-202ENST00000508454 SLITRK5O94991 958 aa7.53□□□□□ -1.2
USO1-202ENST00000508454 ARMCX6Q7L4S7 300 aa7.53□□□□□ -1.2
USO1-202ENST00000508454 FAM8A1Q9UBU6 413 aa7.53□□□□□ -1.2
USO1-202ENST00000508454 CYP8B1Q9UNU6 501 aa7.53□□□□□ -1.2
USO1-202ENST00000508454 SNX11Q9Y5W9 270 aa7.53□□□□□ -1.2
USO1-202ENST00000508454 SLBPQ14493 270 aaKnown RBP eCLIP7.52□□□□□ -1.21
USO1-202ENST00000508454 NKG7Q16617 165 aa7.52□□□□□ -1.21
USO1-202ENST00000508454 PLPPR2Q96GM1 343 aa7.52□□□□□ -1.21
USO1-202ENST00000508454 SPG7Q9UQ90 795 aa7.52□□□□□ -1.21
USO1-202ENST00000508454 SAMM50Q9Y512 469 aa7.52□□□□□ -1.21
USO1-202ENST00000508454 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.21
USO1-202ENST00000508454 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
USO1-202ENST00000508454 FZD5Q13467 585 aa7.51□□□□□ -1.21
USO1-202ENST00000508454 LRRC14Q15048 493 aa7.51□□□□□ -1.21
USO1-202ENST00000508454 PI4K2BQ8TCG2 481 aa7.51□□□□□ -1.21
USO1-202ENST00000508454 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
USO1-202ENST00000508454 LDHBP07195 334 aaKnown RBP7.5□□□□□ -1.21
USO1-202ENST00000508454 ZNF648Q5T619 568 aaPredicted RBP7.5□□□□□ -1.21
USO1-202ENST00000508454 ANGEL2Q5VTE6 544 aaKnown RBP7.5□□□□□ -1.21
USO1-202ENST00000508454 SLC23A3Q6PIS1 610 aa7.5□□□□□ -1.21
USO1-202ENST00000508454 ARHGAP27Q6ZUM4 889 aa7.5□□□□□ -1.21
USO1-202ENST00000508454 GTF2IRD1Q9UHL9 959 aa7.5□□□□□ -1.21
USO1-202ENST00000508454 PRAMEF27A3QJZ7 478 aa7.49□□□□□ -1.21
USO1-202ENST00000508454 LRIG2O94898 1065 aa7.49□□□□□ -1.21
USO1-202ENST00000508454 SV2BQ7L1I2 683 aa7.49□□□□□ -1.21
USO1-202ENST00000508454 FLAD1Q8NFF5 587 aa7.49□□□□□ -1.21
USO1-202ENST00000508454 FAM168AQ92567 244 aa7.49□□□□□ -1.21
USO1-202ENST00000508454 BIN1O00499 593 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 CAP2P40123 477 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 ATP2B2Q01814 1243 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 RIN3Q8TB24 985 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 ELMO3Q96BJ8 720 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 SEMA3GQ9NS98 782 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.48□□□□□ -1.21
USO1-202ENST00000508454 MAPK8IP1Q9UQF2 711 aa7.48□□□□□ -1.21
USO1-202ENST00000508454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.47□□□□□ -1.21
USO1-202ENST00000508454 GFRA2O00451 464 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 GNA15P30679 374 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 WIPI1Q5MNZ9 446 aaPredicted RBP7.47□□□□□ -1.21
USO1-202ENST00000508454 TTBK2Q6IQ55 1244 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 C22orf34Q6ZV56 151 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 ZNF507Q8TCN5 953 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
USO1-202ENST00000508454 PRDM5Q9NQX1 630 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms