RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NAA16Q6N069 864 aaPredicted RBP15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 CCDC84Q86UT8 332 aaPredicted RBP15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 EAF2Q96CJ1 260 aaPredicted RBP15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 TRIM47Q96LD4 638 aa15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 AATFQ9NY61 560 aaKnown RBP eCLIP15.95■□□□□ 0.14
HMGCS1-205ENST00000508319 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
HMGCS1-205ENST00000508319 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
HMGCS1-205ENST00000508319 BCRP11274 1271 aa15.94■□□□□ 0.14
HMGCS1-205ENST00000508319 ZAP70P43403 619 aa15.94■□□□□ 0.14
HMGCS1-205ENST00000508319 FASTKD5Q7L8L6 764 aaKnown RBP15.94■□□□□ 0.14
HMGCS1-205ENST00000508319 SLC34A2O95436 690 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 PLCG2P16885 1265 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 PSMC4P43686 418 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 PPP4CP60510 307 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 RRP1BQ14684 758 aaKnown RBP15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 GADL1Q6ZQY3 521 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 SH3TC2Q8TF17 1288 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 CCDC8Q9H0W5 538 aaPredicted RBP15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 SRRDQ9UH36 339 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 SLC45A1Q9Y2W3 748 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 FLT1P17948 1338 aa15.93■□□□□ 0.14
HMGCS1-205ENST00000508319 BAG3O95817 575 aa15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 EN2P19622 333 aaPredicted RBP15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 OSBPP22059 807 aa15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 PRMT2P55345 433 aa15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 NBPF11Q86T75 865 aa15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 EXOC6BQ9Y2D4 811 aa15.92■□□□□ 0.14
HMGCS1-205ENST00000508319 IGSF3O75054 1194 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 ERC1Q8IUD2 1116 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 TGFBRAP1Q8WUH2 860 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 TMEM106CQ9BVX2 250 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 DHX36Q9H2U1 1008 aaKnown RBP15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 DNAJC18Q9H819 358 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 PI4KBQ9UBF8 816 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 HERC5Q9UII4 1024 aaKnown RBP15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 AGTPBP1Q9UPW5 1226 aa15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 DDX60LQ5H9U9 1706 aaKnown RBP15.91■□□□□ 0.14
HMGCS1-205ENST00000508319 MYH1P12882 1939 aa15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 FMNL1O95466 1100 aaPredicted RBP15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 CAP2P40123 477 aa15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 TREML2Q5T2D2 321 aa15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 METTL16Q86W50 562 aaKnown RBP15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 PROCA1Q8NCQ7 364 aaPredicted RBP15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 NDUFB9Q9Y6M9 179 aa15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 MYPNQ86TC9 1320 aa15.9■□□□□ 0.14
HMGCS1-205ENST00000508319 CEP290O15078 2479 aa15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 IDH1O75874 414 aaKnown RBP15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 MYCP01106 439 aaPredicted RBP15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 SPP2Q13103 211 aa15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 AACSQ86V21 672 aa15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 ANTXR1Q9H6X2 564 aa15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 DOCK3Q8IZD9 2030 aa15.89■□□□□ 0.13
HMGCS1-205ENST00000508319 MS4A1P11836 297 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 CYP7A1P22680 504 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 HOXD10P28358 340 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 FCGRTP55899 365 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 DYNLL1P63167 89 aaKnown RBP15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 PRKCZQ05513 592 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 SLC4A8Q2Y0W8 1093 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 RHPN1Q8TCX5 695 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 RAET1EQ8TD07 263 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 TBC1D2Q9BYX2 928 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
HMGCS1-205ENST00000508319 USP17L5A8MUK1 530 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 HMGCS2P54868 508 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 JAG1P78504 1218 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 MTFR1Q15390 333 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 SIRT2Q8IXJ6 389 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 MIGA1Q8NAN2 632 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 GABRQQ9UN88 632 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
HMGCS1-205ENST00000508319 NAV1Q8NEY1 1877 aa15.86■□□□□ 0.13
HMGCS1-205ENST00000508319 GRK4P32298 578 aa15.86■□□□□ 0.13
HMGCS1-205ENST00000508319 SH3D19Q5HYK7 790 aa15.86■□□□□ 0.13
HMGCS1-205ENST00000508319 ANKRD13CQ8N6S4 541 aa15.86■□□□□ 0.13
HMGCS1-205ENST00000508319 MAGEB6Q8N7X4 407 aa15.86■□□□□ 0.13
HMGCS1-205ENST00000508319 SAP30BPQ9UHR5 308 aaKnown RBP15.86■□□□□ 0.13
HMGCS1-205ENST00000508319 GDF11O95390 407 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 ASNSP08243 561 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 MTMR2Q13614 643 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 FAM110CQ1W6H9 321 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 CRACR2BQ8N4Y2 399 aaPredicted RBP15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 SHISA4Q96DD7 197 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 WDR18Q9BV38 432 aa15.85■□□□□ 0.13
HMGCS1-205ENST00000508319 AS3MTQ9HBK9 375 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 248.8 ms