RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CSADQ9Y600 493 aa8.73□□□□□ -1.01
TRAPPC13-209ENST00000508304 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
TRAPPC13-209ENST00000508304 BMP6P22004 513 aa8.72□□□□□ -1.01
TRAPPC13-209ENST00000508304 AFMP43652 599 aa8.72□□□□□ -1.01
TRAPPC13-209ENST00000508304 FYB2Q5VWT5 728 aa8.72□□□□□ -1.01
TRAPPC13-209ENST00000508304 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
TRAPPC13-209ENST00000508304 GRIN3AQ8TCU5 1115 aa8.72□□□□□ -1.01
TRAPPC13-209ENST00000508304 GNAT3A8MTJ3 354 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 FANCGO15287 622 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 TRIM37O94972 964 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 TSPAN15O95858 294 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 RAP1GAPP47736 663 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 ZBTB37Q5TC79 503 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.02
TRAPPC13-209ENST00000508304 CFPP27918 469 aa8.7□□□□□ -1.02
TRAPPC13-209ENST00000508304 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRAPPC13-209ENST00000508304 C12orf40Q86WS4 652 aa8.7□□□□□ -1.02
TRAPPC13-209ENST00000508304 C1QL4Q86Z23 238 aa8.7□□□□□ -1.02
TRAPPC13-209ENST00000508304 TOX2Q96NM4 488 aa8.7□□□□□ -1.02
TRAPPC13-209ENST00000508304 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC13-209ENST00000508304 ENC1O14682 589 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 GLI1P08151 1106 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 DSC3Q14574 896 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 PPP1R16BQ96T49 567 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 FOXQ1Q9C009 403 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
TRAPPC13-209ENST00000508304 PAGE1O75459 146 aa8.68□□□□□ -1.02
TRAPPC13-209ENST00000508304 ARMCX6Q7L4S7 300 aa8.68□□□□□ -1.02
TRAPPC13-209ENST00000508304 KCT2Q8NC54 265 aa8.68□□□□□ -1.02
TRAPPC13-209ENST00000508304 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
TRAPPC13-209ENST00000508304 SAMM50Q9Y512 469 aa8.68□□□□□ -1.02
TRAPPC13-209ENST00000508304 LRIG2O94898 1065 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 ENOX2Q16206 610 aaKnown RBP8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 SCARA3Q6AZY7 606 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 TPTE2Q6XPS3 522 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 PRR23BQ6ZRT6 265 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 CDC37L1Q7L3B6 337 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 CYFIP1Q7L576 1253 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 KIRREL1Q96J84 757 aa8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 CARS2Q9HA77 564 aaKnown RBP8.67□□□□□ -1.02
TRAPPC13-209ENST00000508304 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 SOWAHDA6NJG2 315 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 SLITRK5O94991 958 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 RASIP1Q5U651 963 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 C22orf34Q6ZV56 151 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 CCER1Q8TC90 406 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 HSPA12BQ96MM6 686 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 CEP44Q9C0F1 390 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
TRAPPC13-209ENST00000508304 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 GSTT1P30711 240 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 GDNFP39905 211 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 LLGL2Q6P1M3 1020 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 LCNL1Q6ZST4 164 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 SYDE1Q6ZW31 735 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 KRTAP4-11Q9BYQ6 195 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 ATP13A1Q9HD20 1204 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 DCTN4Q9UJW0 460 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 PPM1HQ9ULR3 514 aa8.65□□□□□ -1.02
TRAPPC13-209ENST00000508304 CNTNAP4Q9C0A0 1308 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 PRR33A8MZF0 331 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 TREHO43280 583 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 KRT1P04264 644 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 LRRC14Q15048 493 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 NPAS4Q8IUM7 802 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 LRRC56Q8IYG6 542 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 ZSCAN18Q8TBC5 510 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 ZNF507Q8TCN5 953 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 ANKRD24Q8TF21 1146 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
TRAPPC13-209ENST00000508304 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
TRAPPC13-209ENST00000508304 MPZL3Q6UWV2 235 aa8.63□□□□□ -1.03
TRAPPC13-209ENST00000508304 SIAH1Q8IUQ4 282 aa8.63□□□□□ -1.03
TRAPPC13-209ENST00000508304 FAM155AB1AL88 458 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 FBXO24O75426 580 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 INPP5AQ14642 412 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 ANKLE2Q86XL3 938 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 MFSD4AQ8N468 514 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 ELMO3Q96BJ8 720 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 FBRSQ9HAH7 460 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 CYP8B1Q9UNU6 501 aa8.62□□□□□ -1.03
TRAPPC13-209ENST00000508304 C1QTNF9P0C862 333 aa8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 CAP2P40123 477 aa8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 SFRP5Q5T4F7 317 aa8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 OSBPL7Q9BZF2 842 aa8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 ST14Q9Y5Y6 855 aa8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 CAPN6Q9Y6Q1 641 aa8.61□□□□□ -1.03
TRAPPC13-209ENST00000508304 H3BS24 57 aa8.6□□□□□ -1.03
TRAPPC13-209ENST00000508304 CDKAL1Q5VV42 579 aa8.6□□□□□ -1.03
TRAPPC13-209ENST00000508304 LRFN4Q6PJG9 635 aa8.6□□□□□ -1.03
TRAPPC13-209ENST00000508304 FBXO15Q8NCQ5 510 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC13-209ENST00000508304 FBF1Q8TES7 1133 aa8.6□□□□□ -1.03
TRAPPC13-209ENST00000508304 TPX2Q9ULW0 747 aaKnown RBP8.6□□□□□ -1.03
TRAPPC13-209ENST00000508304 PRAMEF27A3QJZ7 478 aa8.59□□□□□ -1.03
TRAPPC13-209ENST00000508304 FGD1P98174 961 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms