RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX41-209ENST00000508279 ABHD8Q96I13 439 aa11.38□□□□□ -0.59
DDX41-209ENST00000508279 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
DDX41-209ENST00000508279 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
DDX41-209ENST00000508279 SUPT16HQ9Y5B9 1047 aaKnown RBP11.38□□□□□ -0.59
DDX41-209ENST00000508279 ZHX2Q9Y6X8 837 aa11.38□□□□□ -0.59
DDX41-209ENST00000508279 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
DDX41-209ENST00000508279 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
DDX41-209ENST00000508279 CCDC85CA6NKD9 419 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 BTBD19C9JJ37 291 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
DDX41-209ENST00000508279 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
DDX41-209ENST00000508279 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
DDX41-209ENST00000508279 FAM43AQ8N2R8 423 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 HAUS7Q99871 368 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 PI4KBQ9UBF8 816 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 PHIPQ8WWQ0 1821 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 PTPRFP10586 1907 aa11.37□□□□□ -0.59
DDX41-209ENST00000508279 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
DDX41-209ENST00000508279 TESPA1A2RU30 521 aaPredicted RBP11.36□□□□□ -0.59
DDX41-209ENST00000508279 TRIM75PA6NK02 468 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 CTNND1O60716 968 aaKnown RBP11.36□□□□□ -0.59
DDX41-209ENST00000508279 IGSF3O75054 1194 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 PTPRAP18433 802 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 ANKRD45Q5TZF3 282 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 GADL1Q6ZQY3 521 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 CTU1Q7Z7A3 348 aaKnown RBP11.36□□□□□ -0.59
DDX41-209ENST00000508279 EXOC6Q8TAG9 804 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■□□□□ 10.4
DDX41-209ENST00000508279 DHX36Q9H2U1 1008 aaKnown RBP11.36□□□□□ -0.59
DDX41-209ENST00000508279 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
DDX41-209ENST00000508279 MYH8P13535 1937 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 TBC1D12O60347 775 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 GDF11O95390 407 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 CHGBP05060 677 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
DDX41-209ENST00000508279 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
DDX41-209ENST00000508279 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 CRNKL1Q9BZJ0 848 aaKnown RBP11.35□□□□□ -0.59
DDX41-209ENST00000508279 ARMT1Q9H993 441 aa11.35□□□□□ -0.59
DDX41-209ENST00000508279 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
DDX41-209ENST00000508279 COL2A1P02458 1487 aaPredicted RBP11.35□□□□□ -0.59
DDX41-209ENST00000508279 PDHXO00330 501 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 MBD4O95243 580 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 ADD2P35612 726 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 CAP2P40123 477 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
DDX41-209ENST00000508279 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 CD99L2Q8TCZ2 262 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 OTUD7AQ8TE49 926 aaPredicted RBP11.34□□□□□ -0.59
DDX41-209ENST00000508279 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
DDX41-209ENST00000508279 CFHR5Q9BXR6 569 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 KCNH4Q9UQ05 1017 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
DDX41-209ENST00000508279 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 CXCL11O14625 94 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 SP3Q02447 781 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 SPP2Q13103 211 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 SHROOM1Q2M3G4 852 aaPredicted RBP11.33□□□□□ -0.6
DDX41-209ENST00000508279 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 TMED8Q6PL24 325 aaPredicted RBP11.33□□□□□ -0.6
DDX41-209ENST00000508279 TTC6Q86TZ1 520 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 FOXP4Q8IVH2 680 aaPredicted RBP11.33□□□□□ -0.6
DDX41-209ENST00000508279 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 DNAJC18Q9H819 358 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 AFG3L2Q9Y4W6 797 aa11.33□□□□□ -0.6
DDX41-209ENST00000508279 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 ERC2O15083 957 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 PRKAB2O43741 272 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 MX1P20591 662 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 PLCD1P51178 756 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 NOM1Q5C9Z4 860 aaKnown RBP11.32□□□□□ -0.6
DDX41-209ENST00000508279 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
DDX41-209ENST00000508279 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 GCC1Q96CN9 775 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
DDX41-209ENST00000508279 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 SERPINB13Q9UIV8 391 aa11.32□□□□□ -0.6
DDX41-209ENST00000508279 A0A0G2JLL6 359 aaPredicted RBP11.31□□□□□ -0.6
DDX41-209ENST00000508279 TLR2O60603 784 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 CYP2C8P10632 490 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 CYP2D6P10635 497 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 HMGCS2P54868 508 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
DDX41-209ENST00000508279 PRRT2Q7Z6L0 340 aaPredicted RBP11.31□□□□□ -0.6
DDX41-209ENST00000508279 KBTBD3Q8NAB2 608 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 ZNF280CQ8ND82 737 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 LNPKQ9C0E8 428 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
DDX41-209ENST00000508279 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
DDX41-209ENST00000508279 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
DDX41-209ENST00000508279 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms