RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
LIN54-207ENST00000508171 CRACR2BQ8N4Y2 399 aaPredicted RBP12.59□□□□□ -0.39
LIN54-207ENST00000508171 WNK3Q9BYP7 1800 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 ERICH2A1L162 156 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 CUTAO60888 179 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 FANCCQ00597 558 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 SART3Q15020 963 aaKnown RBP12.59□□□□□ -0.39
LIN54-207ENST00000508171 PTPN14Q15678 1187 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 FANCBQ8NB91 859 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 CCDC94Q9BW85 323 aaPredicted RBP12.59□□□□□ -0.39
LIN54-207ENST00000508171 RAI14Q9P0K7 980 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 MYH6P13533 1939 aa12.59□□□□□ -0.39
LIN54-207ENST00000508171 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 BMP6P22004 513 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 GSDMDP57764 484 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 ERFEQ4G0M1 354 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 ZNF654Q8IZM8 581 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
LIN54-207ENST00000508171 CNNM3Q8NE01 707 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 ANKRD7Q92527 254 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 DPF2Q92785 391 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 IMPACTQ9P2X3 320 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 PCDHB6Q9Y5E3 794 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 TIAM2Q8IVF5 1701 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 IKBKBO14920 756 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
LIN54-207ENST00000508171 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
LIN54-207ENST00000508171 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 hCG_1642624A0A1W2PR95 340 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 DYNLL1P63167 89 aaKnown RBP12.57□□□□□ -0.4
LIN54-207ENST00000508171 MDM2Q00987 491 aaPredicted RBP12.57□□□□□ -0.4
LIN54-207ENST00000508171 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
LIN54-207ENST00000508171 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
LIN54-207ENST00000508171 E4F1Q66K89 784 aaPredicted RBP12.57□□□□□ -0.4
LIN54-207ENST00000508171 WASF1Q92558 559 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 UBAC1Q9BSL1 405 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 DEXIO95424 95 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 TPM4P67936 248 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 PDE4BQ07343 736 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 HSP90AA4PQ58FG1 418 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 NID2Q14112 1375 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 RTL9Q8NET4 1388 aa12.57□□□□□ -0.4
LIN54-207ENST00000508171 SEC23AQ15436 765 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 TMTC2Q8N394 836 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 ZNF384Q8TF68 577 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 FANCLQ9NW38 375 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 FBXO2Q9UK22 296 aaPredicted RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 TNKSO95271 1327 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 POLR2DO15514 142 aaKnown RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 PRDM1O75626 825 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 UBASH3AP57075 661 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 EVX2Q03828 476 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 PDILTQ8N807 584 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
LIN54-207ENST00000508171 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
LIN54-207ENST00000508171 SERPINC1P01008 464 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 SFPQP23246 707 aaKnown RBP eCLIP12.55□□□□□ -0.4
LIN54-207ENST00000508171 PTPREP23469 700 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 MYL5Q02045 173 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 ENAHQ8N8S7 591 aaPredicted RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 CCDC196A0A1B0GTZ2 297 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 RILPL1Q5EBL4 403 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 ESR2Q92731 530 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 FAM84BQ96KN1 310 aaPredicted RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 MINPP1Q9UNW1 487 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
LIN54-207ENST00000508171 TMEM232C9JQI7 657 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 CBX1P83916 185 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
LIN54-207ENST00000508171 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms