RNA–Protein interactions for RNA: ENST00000508003.1

HSPA9-210, Transcript of heat shock protein family A (Hsp70) member 9, human

TSL 2

Gene HSPA9, Length 582 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HSPA9-210	ENST00000508003	TBC1D9	Q6ZT07	1266 aa		13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	RHPN1	Q8TCX5	695 aa		13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	WRNIP1	Q96S55	665 aa		13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	ZNF341	Q9BYN7	854 aa		13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	ELP3	Q9H9T3	547 aa		13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	SNRK	Q9NRH2	765 aa		13.74	□□□□□ -0.21
HSPA9-210	ENST00000508003	ENTPD3	O75355	529 aa		13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	BAG3	O95817	575 aa		13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	IFIT2	P09913	472 aa	Known RBP	13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	NAA16	Q6N069	864 aa	Predicted RBP	13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	NSUN4	Q96CB9	384 aa	Known RBP	13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	EAF2	Q96CJ1	260 aa	Predicted RBP	13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	OPTN	Q96CV9	577 aa		13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	IDI2	Q9BXS1	227 aa		13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	BCL11A	Q9H165	835 aa		13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	DBNL	Q9UJU6	430 aa	Known RBP	13.73	□□□□□ -0.21
HSPA9-210	ENST00000508003	GPR75-ASB3	A0A0A6YYF3	556 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	RGS3	P49796	1198 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	NFIA	Q12857	509 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	PICALM	Q13492	652 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	VGLL4	Q14135	290 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	C20orf194	Q5TEA3	1177 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	MIGA2	Q7L4E1	593 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	IL1RAPL2	Q9NP60	686 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	OTOF	Q9HC10	1997 aa		13.72	□□□□□ -0.21
HSPA9-210	ENST00000508003	WDHD1	O75717	1129 aa	Predicted RBP	13.71	□□□□□ -0.21
HSPA9-210	ENST00000508003	ZAP70	P43403	619 aa		13.71	□□□□□ -0.21
HSPA9-210	ENST00000508003	GTF2A2	P52657	109 aa		13.71	□□□□□ -0.21
HSPA9-210	ENST00000508003	ERO1B	Q86YB8	467 aa		13.71	□□□□□ -0.21
HSPA9-210	ENST00000508003	FAM198A	Q9UFP1	575 aa		13.71	□□□□□ -0.21
HSPA9-210	ENST00000508003	MAST2	Q6P0Q8	1798 aa		13.71	□□□□□ -0.22
HSPA9-210	ENST00000508003	IDH1	O75874	414 aa	Known RBP	13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	TBC1D8	O95759	1140 aa		13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	CYP2E1	P05181	493 aa	Predicted RBP	13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	MAP3K12	Q12852	859 aa		13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	TTF1	Q15361	905 aa	Predicted RBP	13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	TEX11	Q8IYF3	940 aa		13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	TLR7	Q9NYK1	1049 aa	Known RBP	13.7	□□□□□ -0.22
HSPA9-210	ENST00000508003	DOCK2	Q92608	1830 aa		13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	SOX10	P56693	466 aa		13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	DGKZ	Q13574	1117 aa		13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	TMED8	Q6PL24	325 aa	Predicted RBP	13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	CERS3	Q8IU89	383 aa		13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	SIRT2	Q8IXJ6	389 aa		13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.69	□□□□□ -0.22
HSPA9-210	ENST00000508003	SPDYE5	A6NIY4	337 aa		13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	CETP	P11597	493 aa		13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	RRP1	P56182	461 aa	Known RBP	13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	SNAPC2	Q13487	334 aa		13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	NOM1	Q5C9Z4	860 aa	Known RBP	13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	LRRCC1	Q9C099	1032 aa		13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	PICK1	Q9NRD5	415 aa		13.68	□□□□□ -0.22
HSPA9-210	ENST00000508003	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	2e-24	■■■■■ 30.9
HSPA9-210	ENST00000508003	CCL15-CCL14	A0A0B4J2E2	113 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	GPR25	O00155	361 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	CYP7A1	P22680	504 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	GJA5	P36382	358 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	RHBDL3	P58872	404 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	PPAT	Q06203	517 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	PPIL2	Q13356	520 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	CCL15	Q16663	113 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	ZFPM1	Q8IX07	1006 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	ZNF687	Q8N1G0	1237 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	ZNF384	Q8TF68	577 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	CFHR5	Q9BXR6	569 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	TRIM34	Q9BYJ4	488 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	PIH1D3	Q9NQM4	214 aa	Known RBP	13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	ZNF112	Q9UJU3	913 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	SNCAIP	Q9Y6H5	919 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	LAMB1	P07942	1786 aa		13.67	□□□□□ -0.22
HSPA9-210	ENST00000508003	TESPA1	A2RU30	521 aa	Predicted RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	FKTN	O75072	461 aa		13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	INPP5B	P32019	993 aa		13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	PPP4C	P60510	307 aa		13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	CTU1	Q7Z7A3	348 aa	Known RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.66	□□□□□ -0.22	5e-6	■■■■□ 19.4
HSPA9-210	ENST00000508003	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	DNAJC2	Q99543	621 aa	Known RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	DHX36	Q9H2U1	1008 aa	Known RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	DDX4	Q9NQI0	724 aa	Known RBP	13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	RFX7	Q2KHR2	1363 aa		13.66	□□□□□ -0.22
HSPA9-210	ENST00000508003	DDTL	A6NHG4	134 aa	Predicted RBP	13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	CTNND1	O60716	968 aa	Known RBP	13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	NOL9	Q5SY16	702 aa	Known RBP	13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	MAGEB6	Q8N7X4	407 aa		13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	GPATCH3	Q96I76	525 aa		13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	ZFYVE28	Q9HCC9	887 aa		13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	ATRNL1	Q5VV63	1379 aa		13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	COL2A1	P02458	1487 aa	Predicted RBP	13.65	□□□□□ -0.22
HSPA9-210	ENST00000508003	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.64	□□□□□ -0.23
HSPA9-210	ENST00000508003	IRF6	O14896	467 aa		13.64	□□□□□ -0.23
HSPA9-210	ENST00000508003	TBC1D12	O60347	775 aa		13.64	□□□□□ -0.23
HSPA9-210	ENST00000508003	HLA-DOA	P06340	250 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms