RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RTN1Q16799 776 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 OXER1Q8TDS5 423 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 TNKSO95271 1327 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 A0A1W2PQ27 194 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 A0A1W2PQ64 194 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 A0A1W2PQD8 194 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 GRIN1Q05586 938 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 TRIM29Q14134 588 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 SHC4Q6S5L8 630 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 UBAC1Q9BSL1 405 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.28
DDX41-208ENST00000507955 ERICH2A1L162 156 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 BECN2A8MW95 431 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 USP17L21D6R901 530 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 CTAGE5O15320 804 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
DDX41-208ENST00000507955 PTPAQ15257 358 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 SHISA4Q96DD7 197 aa16.77■□□□□ 0.28
DDX41-208ENST00000507955 BCORQ6W2J9 1755 aa16.77■□□□□ 0.27
DDX41-208ENST00000507955 CYP2D6P10635 497 aa16.77■□□□□ 0.27
DDX41-208ENST00000507955 NBPF11Q86T75 865 aa16.77■□□□□ 0.27
DDX41-208ENST00000507955 FANCBQ8NB91 859 aa16.77■□□□□ 0.27
DDX41-208ENST00000507955 NSUN4Q96CB9 384 aaKnown RBP16.77■□□□□ 0.27
DDX41-208ENST00000507955 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.27
DDX41-208ENST00000507955 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.27
DDX41-208ENST00000507955 RTCBQ9Y3I0 505 aaKnown RBP16.77■□□□□ 0.27
DDX41-208ENST00000507955 IFNAR1P17181 557 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 TM4SF1P30408 202 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 TOB1P50616 345 aaPredicted RBP16.76■□□□□ 0.27
DDX41-208ENST00000507955 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
DDX41-208ENST00000507955 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 FBXO33Q7Z6M2 555 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
DDX41-208ENST00000507955 CASZ1Q86V15 1759 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 ECM29Q5VYK3 1845 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 MYH2Q9UKX2 1941 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 FAM205CA6NFA0 338 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.272e-13■■□□□ 14.3
DDX41-208ENST00000507955 FAM47AQ5JRC9 791 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
DDX41-208ENST00000507955 CRACR2BQ8N4Y2 399 aaPredicted RBP16.76■□□□□ 0.27
DDX41-208ENST00000507955 CACNA1SQ13698 1873 aa16.76■□□□□ 0.27
DDX41-208ENST00000507955 LAMB2P55268 1798 aa16.75■□□□□ 0.27
DDX41-208ENST00000507955 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
DDX41-208ENST00000507955 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
DDX41-208ENST00000507955 ANO10Q9NW15 660 aa16.75■□□□□ 0.27
DDX41-208ENST00000507955 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
DDX41-208ENST00000507955 NFIXQ14938 502 aa16.75■□□□□ 0.27
DDX41-208ENST00000507955 SEC23AQ15436 765 aa16.75■□□□□ 0.27
DDX41-208ENST00000507955 GOLGA6L6A8MZA4 724 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 FOXN1O15353 648 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 PLEKHA8P1O95397 391 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 TPM3P06753 285 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
DDX41-208ENST00000507955 CMA1P23946 247 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 MTERF4Q7Z6M4 381 aaKnown RBP16.74■□□□□ 0.27
DDX41-208ENST00000507955 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
DDX41-208ENST00000507955 ESR2Q92731 530 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 MMP1P03956 469 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 PNOCQ13519 176 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 GRIK5Q16478 980 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 NOSTRINQ8IVI9 506 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 RNF41Q9H4P4 317 aaPredicted RBP16.74■□□□□ 0.27
DDX41-208ENST00000507955 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
DDX41-208ENST00000507955 SYKP43405 635 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 FILIP1Q7Z7B0 1213 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
DDX41-208ENST00000507955 ZSCAN10Q96SZ4 725 aaPredicted RBP16.73■□□□□ 0.27
DDX41-208ENST00000507955 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 PCDHB6Q9Y5E3 794 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 RFC4P35249 363 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 LONRF3Q496Y0 759 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
DDX41-208ENST00000507955 EARS2Q5JPH6 523 aaKnown RBP16.73■□□□□ 0.27
DDX41-208ENST00000507955 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 CEP57L1Q8IYX8 460 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 NYXQ9GZU5 481 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
DDX41-208ENST00000507955 BTAF1O14981 1849 aa16.72■□□□□ 0.27
DDX41-208ENST00000507955 A0A1B0GUL6 1792 aa16.72■□□□□ 0.27
DDX41-208ENST00000507955 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
DDX41-208ENST00000507955 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
DDX41-208ENST00000507955 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
DDX41-208ENST00000507955 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
DDX41-208ENST00000507955 DCP1AQ9NPI6 582 aaPredicted RBP16.72■□□□□ 0.27
DDX41-208ENST00000507955 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
DDX41-208ENST00000507955 TIAM2Q8IVF5 1701 aa16.72■□□□□ 0.27
DDX41-208ENST00000507955 RC3H1Q5TC82 1133 aaKnown RBP16.71■□□□□ 0.27
DDX41-208ENST00000507955 USP17L8P0C7I0 530 aa16.71■□□□□ 0.27
DDX41-208ENST00000507955 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
DDX41-208ENST00000507955 ZRSR1Q15695 479 aaKnown RBP16.71■□□□□ 0.27
DDX41-208ENST00000507955 USP49Q70CQ1 688 aa16.71■□□□□ 0.27
DDX41-208ENST00000507955 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms