RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 CTBSQ01459 385 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 TNP2Q05952 138 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 AMOTQ4VCS5 1084 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 SAMD5Q5TGI4 173 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 TMEM164Q5U3C3 297 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 TAF3Q5VWG9 929 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 LYPD4Q6UWN0 246 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 USP48Q86UV5 1035 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 SVOPQ8N4V2 548 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 ZGPATQ8N5A5 531 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 DDX19AQ9NUU7 478 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 NSFL1CQ9UNZ2 370 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 TBX22Q9Y458 520 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 PAXBP1Q9Y5B6 917 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 RIMS1Q86UR5 1692 aaKnown RBP6.93□□□□□ -1.3
CLDND1-213ENST00000506927 TOPAZ1Q8N9V7 1692 aa6.93□□□□□ -1.3
CLDND1-213ENST00000506927 AK9Q5TCS8 1911 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 KIF2AO00139 706 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 PRMT3O60678 531 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 F13A1P00488 732 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 HMGB1P09429 215 aaKnown RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 FAM157BP0CG42 384 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 KCNJ4P48050 445 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 FAM193AP78312 1265 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 DCTN1Q14203 1278 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 NOLC1Q14978 699 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 MTHFSDQ2M296 383 aaKnown RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 KCNH5Q8NCM2 988 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 ZNF280CQ8ND82 737 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 PKNOX2Q96KN3 472 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 FEZ1Q99689 392 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 CCDC94Q9BW85 323 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 GTPBP4Q9BZE4 634 aaKnown RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 ZSCAN16Q9H4T2 348 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-213ENST00000506927 ECHDC1Q9NTX5 307 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 PDRG1Q9NUG6 133 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 FAM13BQ9NYF5 915 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 EXOC6BQ9Y2D4 811 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 ZDHHC9Q9Y397 364 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 METP08581 1390 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 OVOS2A0A0G2JMS6 1433 aa6.92□□□□□ -1.3
CLDND1-213ENST00000506927 NRXN3Q9Y4C0 1643 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 SRGAP3O43295 1099 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 FOXO3O43524 673 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 ADCY5O95622 1261 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-213ENST00000506927 BMP4P12644 408 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 MAP2K3P46734 347 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 MTX1Q13505 466 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 MAP3K11Q16584 847 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 PLEKHO1Q53GL0 409 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-213ENST00000506927 HSP90AB2PQ58FF8 381 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 UTP14CQ5TAP6 766 aaKnown RBP6.91□□□□□ -1.3
CLDND1-213ENST00000506927 KCNB2Q92953 911 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 ACDQ96AP0 544 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 SUSD3Q96L08 255 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 NAT10Q9H0A0 1025 aaKnown RBP6.91□□□□□ -1.3
CLDND1-213ENST00000506927 DBF4Q9UBU7 674 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-213ENST00000506927 LRRFIP2Q9Y608 721 aaKnown RBP6.91□□□□□ -1.3
CLDND1-213ENST00000506927 NCAPD2Q15021 1401 aa6.91□□□□□ -1.3
CLDND1-213ENST00000506927 EFSO43281 561 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 CCP110O43303 1012 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 CD33P20138 364 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 SYT1P21579 422 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 TPM4P67936 248 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 G3BP1Q13283 466 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 OCLNQ16625 522 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 RTN1Q16799 776 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 RUFY3Q7L099 469 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 PPP1R42Q7Z4L9 355 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 RGS22Q8NE09 1264 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 OTUD7AQ8TE49 926 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 DNAAF4Q8WXU2 420 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 VTI1AQ96AJ9 217 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 USP44Q9H0E7 712 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 NUP62CLQ9H1M0 184 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 STRN4Q9NRL3 753 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 HYPKQ9NX55 129 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 C9orf78Q9NZ63 289 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 ANKIB1Q9P2G1 1089 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 SNX14Q9Y5W7 946 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLDND1-213ENST00000506927 MAP3K19Q56UN5 1328 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 NPHP3Q7Z494 1330 aa6.9□□□□□ -1.3
CLDND1-213ENST00000506927 RFX7Q2KHR2 1363 aa6.9□□□□□ -1.31
CLDND1-213ENST00000506927 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
CLDND1-213ENST00000506927 TUBGCP6Q96RT7 1819 aa6.9□□□□□ -1.31
CLDND1-213ENST00000506927 GOLGA6L19H0YKK7 550 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 CASTP20810 708 aaKnown RBP6.89□□□□□ -1.31
CLDND1-213ENST00000506927 NEXNQ0ZGT2 675 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 TEFQ10587 303 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 ZRSR1Q15695 479 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms