RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 ZBTB43O43298 467 aa21.67■■□□□ 1.06
SMN2-206ENST00000506734 EVX2Q03828 476 aa21.67■■□□□ 1.06
SMN2-206ENST00000506734 USP17L1Q7RTZ2 530 aa21.67■■□□□ 1.06
SMN2-206ENST00000506734 DDX11Q96FC9 970 aa21.67■■□□□ 1.06
SMN2-206ENST00000506734 MXD3Q9BW11 206 aa21.67■■□□□ 1.06
SMN2-206ENST00000506734 SLC12A7Q9Y666 1083 aa21.67■■□□□ 1.06
SMN2-206ENST00000506734 TNKSO95271 1327 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 PPIP5K2O43314 1243 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 HDLBPQ00341 1268 aaKnown RBP21.66■■□□□ 1.06
SMN2-206ENST00000506734 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
SMN2-206ENST00000506734 CDC37L1Q7L3B6 337 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 MAPKAPK5Q8IW41 473 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 ZSCAN10Q96SZ4 725 aaPredicted RBP21.66■■□□□ 1.06
SMN2-206ENST00000506734 KCNQ5Q9NR82 932 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 LMBRD1Q9NUN5 540 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 PIM2Q9P1W9 311 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 PSME4Q14997 1843 aa21.66■■□□□ 1.06
SMN2-206ENST00000506734 F8W031 263 aaPredicted RBP21.65■■□□□ 1.06
SMN2-206ENST00000506734 RANBP6O60518 1105 aaKnown RBP21.65■■□□□ 1.06
SMN2-206ENST00000506734 IQCA1Q86XH1 822 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 TEKT1Q969V4 418 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 SGIP1Q9BQI5 828 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 ZKSCAN3Q9BRR0 538 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 BRCA1P38398 1863 aaKnown RBP21.65■■□□□ 1.06
SMN2-206ENST00000506734 CPLX1O14810 134 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 PRDM1O75626 825 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 SYNE3Q6ZMZ3 975 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
SMN2-206ENST00000506734 GOLGA8AA7E2F4 631 aa21.64■■□□□ 1.05
SMN2-206ENST00000506734 CDKL5O76039 1030 aa21.64■■□□□ 1.05
SMN2-206ENST00000506734 FDPSP14324 419 aaKnown RBP21.64■■□□□ 1.05
SMN2-206ENST00000506734 MICU3Q86XE3 530 aa21.64■■□□□ 1.05
SMN2-206ENST00000506734 ENAHQ8N8S7 591 aaPredicted RBP21.64■■□□□ 1.05
SMN2-206ENST00000506734 MYH1P12882 1939 aa21.63■■□□□ 1.05
SMN2-206ENST00000506734 POLR3DP05423 398 aaPredicted RBP21.63■■□□□ 1.05
SMN2-206ENST00000506734 CRKP46108 304 aa21.63■■□□□ 1.05
SMN2-206ENST00000506734 CPLX2Q6PUV4 134 aaKnown RBP21.63■■□□□ 1.05
SMN2-206ENST00000506734 RAB11FIP4Q86YS3 637 aa21.63■■□□□ 1.05
SMN2-206ENST00000506734 CHAMP1Q96JM3 812 aa21.63■■□□□ 1.05
SMN2-206ENST00000506734 ZDHHC15Q96MV8 337 aa21.63■■□□□ 1.05
SMN2-206ENST00000506734 FAM217BQ9NTX9 383 aaPredicted RBP21.63■■□□□ 1.05
SMN2-206ENST00000506734 ADAMTSL1Q8N6G6 1762 aa21.63■■□□□ 1.05
SMN2-206ENST00000506734 YDJCA8MPS7 323 aa21.62■■□□□ 1.05
SMN2-206ENST00000506734 CDC27P30260 824 aa21.62■■□□□ 1.05
SMN2-206ENST00000506734 SCNN1DP51172 638 aa21.62■■□□□ 1.05
SMN2-206ENST00000506734 APOBEC3HQ6NTF7 200 aaKnown RBP21.62■■□□□ 1.05
SMN2-206ENST00000506734 TMEM87AQ8NBN3 555 aa21.62■■□□□ 1.05
SMN2-206ENST00000506734 ZNF287Q9HBT7 754 aa21.62■■□□□ 1.05
SMN2-206ENST00000506734 H3BQV1 296 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 ADD1P35611 737 aaKnown RBP21.61■■□□□ 1.05
SMN2-206ENST00000506734 PLCD1P51178 756 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 PPP2R5BQ15173 497 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 NTRK3Q16288 839 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 IFFO2Q5TF58 517 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 C16orf86Q6ZW13 317 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 ZNF654Q8IZM8 581 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 SAP30BPQ9UHR5 308 aaKnown RBP21.61■■□□□ 1.05
SMN2-206ENST00000506734 CD2APQ9Y5K6 639 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 ECM29Q5VYK3 1845 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 WDHD1O75717 1129 aaPredicted RBP21.61■■□□□ 1.05
SMN2-206ENST00000506734 RXRAP19793 462 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 DALRD3Q5D0E6 543 aaKnown RBP21.61■■□□□ 1.05
SMN2-206ENST00000506734 IFIT1BQ5T764 474 aaKnown RBP21.61■■□□□ 1.05
SMN2-206ENST00000506734 CDC42EP5Q6NZY7 148 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 DYNLL2Q96FJ2 89 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 MYL10Q9BUA6 226 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 USP40Q9NVE5 1235 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 ORC3Q9UBD5 711 aaPredicted RBP21.61■■□□□ 1.05
SMN2-206ENST00000506734 SERPINA10Q9UK55 444 aa21.61■■□□□ 1.05
SMN2-206ENST00000506734 STK36Q9NRP7 1315 aa21.6■■□□□ 1.05
SMN2-206ENST00000506734 TSPY2A6NKD2 308 aa21.6■■□□□ 1.05
SMN2-206ENST00000506734 PRPF40AO75400 957 aaKnown RBP21.6■■□□□ 1.05
SMN2-206ENST00000506734 KLHL40Q2TBA0 621 aa21.6■■□□□ 1.05
SMN2-206ENST00000506734 CCDC178Q5BJE1 867 aa21.6■■□□□ 1.05
SMN2-206ENST00000506734 KIAA0825Q8IV33 1275 aa21.6■■□□□ 1.05
SMN2-206ENST00000506734 ZSCAN16Q9H4T2 348 aaPredicted RBP21.6■■□□□ 1.05
SMN2-206ENST00000506734 MYO3BQ8WXR4 1341 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 TCHHQ07283 1943 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 RESTQ13127 1097 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 RTN1Q16799 776 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 SLC4A8Q2Y0W8 1093 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 FAM47AQ5JRC9 791 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 MKNK2Q9HBH9 465 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 TCP11L1Q9NUJ3 509 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 COL4A5P29400 1685 aa21.59■■□□□ 1.05
SMN2-206ENST00000506734 DDAH1O94760 285 aa21.58■■□□□ 1.05
SMN2-206ENST00000506734 IFNAR1P17181 557 aa21.58■■□□□ 1.05
SMN2-206ENST00000506734 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.05
SMN2-206ENST00000506734 ANKS1AQ92625 1134 aa21.58■■□□□ 1.05
SMN2-206ENST00000506734 DDX4Q9NQI0 724 aaKnown RBP21.58■■□□□ 1.05
SMN2-206ENST00000506734 ZNF277Q9NRM2 450 aaPredicted RBP21.58■■□□□ 1.05
SMN2-206ENST00000506734 FER1L6Q2WGJ9 1857 aa21.58■■□□□ 1.04
SMN2-206ENST00000506734 CALM1P0DP23 149 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 CALM2P0DP24 149 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 CALM3P0DP25 149 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 RASA1P20936 1047 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 TFAP4Q01664 338 aa21.57■■□□□ 1.04
SMN2-206ENST00000506734 FOXD4L6Q3SYB3 417 aaPredicted RBP21.57■■□□□ 1.04
SMN2-206ENST00000506734 FOXD4L3Q6VB84 417 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms