RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 ZNF532Q9HCE3 1301 aa16.58■□□□□ 0.24
SERF1B-204ENST00000506542 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
SERF1B-204ENST00000506542 ZFYP08048 801 aaPredicted RBP16.57■□□□□ 0.24
SERF1B-204ENST00000506542 MAP2K2P36507 400 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 ANAPC15P60006 121 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 MAP3K12Q12852 859 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 ZMYM1Q5SVZ6 1142 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.57■□□□□ 0.24
SERF1B-204ENST00000506542 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 SAP30BPQ9UHR5 308 aaKnown RBP16.57■□□□□ 0.24
SERF1B-204ENST00000506542 MYH1P12882 1939 aa16.57■□□□□ 0.24
SERF1B-204ENST00000506542 TCRBV5S4A2TA0A5A2 114 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 PTH1RQ03431 593 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 EVX2Q03828 476 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 RABEP1Q15276 862 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 SPRYD7Q5W111 196 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
SERF1B-204ENST00000506542 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 ENTPD3O75355 529 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 ANKRD13AQ8IZ07 590 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 WNK4Q96J92 1243 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
SERF1B-204ENST00000506542 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.56■□□□□ 0.24
SERF1B-204ENST00000506542 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
SERF1B-204ENST00000506542 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 SNCAIPQ9Y6H5 919 aa16.56■□□□□ 0.24
SERF1B-204ENST00000506542 FLT1P17948 1338 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 BAG3O95817 575 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 PPP4CP60510 307 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
SERF1B-204ENST00000506542 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 SNX21Q969T3 373 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 OPTNQ96CV9 577 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 SEC62Q99442 399 aaKnown RBP16.55■□□□□ 0.24
SERF1B-204ENST00000506542 RIOK1Q9BRS2 568 aaKnown RBP16.55■□□□□ 0.24
SERF1B-204ENST00000506542 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 CASP8AP2Q9UKL3 1982 aa16.55■□□□□ 0.24
SERF1B-204ENST00000506542 BAZ2AQ9UIF9 1905 aaKnown RBP16.54■□□□□ 0.24
SERF1B-204ENST00000506542 LBX1P52954 281 aa16.54■□□□□ 0.24
SERF1B-204ENST00000506542 COL13A1Q5TAT6 717 aaPredicted RBP16.54■□□□□ 0.24
SERF1B-204ENST00000506542 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
SERF1B-204ENST00000506542 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
SERF1B-204ENST00000506542 LCORLQ8N3X6 602 aa16.54■□□□□ 0.24
SERF1B-204ENST00000506542 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
SERF1B-204ENST00000506542 NAV1Q8NEY1 1877 aa16.54■□□□□ 0.24
SERF1B-204ENST00000506542 TRPA1O75762 1119 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 ADD2P35612 726 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
SERF1B-204ENST00000506542 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
SERF1B-204ENST00000506542 CCDC129Q6ZRS4 1044 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 APPBP2Q92624 585 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 AIDAQ96BJ3 306 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 ATAD5Q96QE3 1844 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 MAGEB6P1A0A0J9YX57 407 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 PRKAB2O43741 272 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
SERF1B-204ENST00000506542 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 KCNB2Q92953 911 aa16.53■□□□□ 0.24
SERF1B-204ENST00000506542 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
SERF1B-204ENST00000506542 DDX60LQ5H9U9 1706 aaKnown RBP16.52■□□□□ 0.24
SERF1B-204ENST00000506542 LAMB1P07942 1786 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 SMIM22K7EJ46 135 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 UBE3CQ15386 1083 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 HSCBQ8IWL3 235 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 OSBP2Q969R2 916 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 RNF186Q9NXI6 227 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 CSADQ9Y600 493 aa16.52■□□□□ 0.23
SERF1B-204ENST00000506542 DOCK1Q14185 1865 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 M0R2C6 588 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 MBD4O95243 580 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 USP5P45974 858 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 BEGAINQ9BUH8 593 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 PUS7LQ9H0K6 701 aaKnown RBP16.51■□□□□ 0.23
SERF1B-204ENST00000506542 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 SNX14Q9Y5W7 946 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 PHIPQ8WWQ0 1821 aa16.51■□□□□ 0.23
SERF1B-204ENST00000506542 IGF2BP3O00425 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
SERF1B-204ENST00000506542 PLCG2P16885 1265 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 LAMA4Q16363 1823 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 TBC1D8O95759 1140 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 JAG1P78504 1218 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 RASEFQ8IZ41 740 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 PTPN18Q99952 460 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
SERF1B-204ENST00000506542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.5■□□□□ 0.23
SERF1B-204ENST00000506542 CENPFP49454 3210 aa16.49■□□□□ 0.23
SERF1B-204ENST00000506542 IRF6O14896 467 aa16.49■□□□□ 0.23
SERF1B-204ENST00000506542 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms