RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CEP350Q5VT06 3117 aa8.81□□□□□ -1
GYPB-206ENST00000506516 TTC41PQ6P2S7 1318 aa8.8□□□□□ -1
GYPB-206ENST00000506516 WDR33Q9C0J8 1336 aaKnown RBP8.8□□□□□ -1
GYPB-206ENST00000506516 UBE2Q2LH0YL09 131 aa8.8□□□□□ -1
GYPB-206ENST00000506516 ENTPD3O75355 529 aa8.8□□□□□ -1
GYPB-206ENST00000506516 ZMYND10O75800 440 aa8.8□□□□□ -1
GYPB-206ENST00000506516 IGHDP01880 384 aa8.8□□□□□ -1
GYPB-206ENST00000506516 CENPBP07199 599 aaPredicted RBP8.8□□□□□ -1
GYPB-206ENST00000506516 OSBPP22059 807 aa8.8□□□□□ -1
GYPB-206ENST00000506516 MAP2K2P36507 400 aa8.8□□□□□ -1
GYPB-206ENST00000506516 IREB2P48200 963 aaKnown RBP8.8□□□□□ -1
GYPB-206ENST00000506516 PPP4CP60510 307 aa8.8□□□□□ -1
GYPB-206ENST00000506516 GRM1Q13255 1194 aa8.8□□□□□ -1
GYPB-206ENST00000506516 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
GYPB-206ENST00000506516 B4GALNT3Q6L9W6 998 aa8.8□□□□□ -1
GYPB-206ENST00000506516 CYP4F22Q6NT55 531 aa8.8□□□□□ -1
GYPB-206ENST00000506516 ZSCAN29Q8IWY8 852 aaPredicted RBP8.8□□□□□ -1
GYPB-206ENST00000506516 CDAN1Q8IWY9 1227 aa8.8□□□□□ -1
GYPB-206ENST00000506516 SMC5Q8IY18 1101 aa8.8□□□□□ -1
GYPB-206ENST00000506516 MAGEB6Q8N7X4 407 aa8.8□□□□□ -1
GYPB-206ENST00000506516 ZNF384Q8TF68 577 aa8.8□□□□□ -1
GYPB-206ENST00000506516 CAPNS2Q96L46 248 aa8.8□□□□□ -1
GYPB-206ENST00000506516 TEPSINQ96N21 525 aa8.8□□□□□ -1
GYPB-206ENST00000506516 AATFQ9NY61 560 aaKnown RBP eCLIP8.8□□□□□ -1
GYPB-206ENST00000506516 GLRX3O76003 335 aaKnown RBP8.79□□□□□ -1
GYPB-206ENST00000506516 MX1P20591 662 aa8.79□□□□□ -1
GYPB-206ENST00000506516 RGS3P49796 1198 aa8.79□□□□□ -1
GYPB-206ENST00000506516 RHBDL3P58872 404 aa8.79□□□□□ -1
GYPB-206ENST00000506516 NFIAQ12857 509 aa8.79□□□□□ -1
GYPB-206ENST00000506516 PICALMQ13492 652 aa8.79□□□□□ -1
GYPB-206ENST00000506516 MAP3K11Q16584 847 aa8.79□□□□□ -1
GYPB-206ENST00000506516 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
GYPB-206ENST00000506516 DCAF15Q66K64 600 aa8.79□□□□□ -1
GYPB-206ENST00000506516 MOB2Q70IA6 237 aa8.79□□□□□ -1
GYPB-206ENST00000506516 CHD1LQ86WJ1 897 aa8.79□□□□□ -1
GYPB-206ENST00000506516 TEX11Q8IYF3 940 aa8.79□□□□□ -1
GYPB-206ENST00000506516 JMYQ8N9B5 988 aa8.79□□□□□ -1
GYPB-206ENST00000506516 MARVELD3Q96A59 401 aa8.79□□□□□ -1
GYPB-206ENST00000506516 SLC10A4Q96EP9 437 aa8.79□□□□□ -1
GYPB-206ENST00000506516 PLSCR2Q9NRY7 297 aa8.79□□□□□ -1
GYPB-206ENST00000506516 FAM198AQ9UFP1 575 aa8.79□□□□□ -1
GYPB-206ENST00000506516 USP2O75604 605 aaPredicted RBP8.78□□□□□ -1
GYPB-206ENST00000506516 WDHD1O75717 1129 aaPredicted RBP8.78□□□□□ -1
GYPB-206ENST00000506516 USP5P45974 858 aa8.78□□□□□ -1
GYPB-206ENST00000506516 MAP2K1Q02750 393 aaPredicted RBP8.78□□□□□ -1
GYPB-206ENST00000506516 NUCB1Q02818 461 aa8.78□□□□□ -1
GYPB-206ENST00000506516 NOGQ13253 232 aa8.78□□□□□ -1
GYPB-206ENST00000506516 LDLRAD1Q5T700 205 aa8.78□□□□□ -1
GYPB-206ENST00000506516 ANKRD13AQ8IZ07 590 aa8.78□□□□□ -1
GYPB-206ENST00000506516 SH3RF3Q8TEJ3 882 aaPredicted RBP8.78□□□□□ -1
GYPB-206ENST00000506516 TGFBRAP1Q8WUH2 860 aa8.78□□□□□ -1
GYPB-206ENST00000506516 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
GYPB-206ENST00000506516 LNPKQ9C0E8 428 aa8.78□□□□□ -1
GYPB-206ENST00000506516 ZNF532Q9HCE3 1301 aa8.78□□□□□ -1
GYPB-206ENST00000506516 MAGEB6P1A0A0J9YX57 407 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 NEFLP07196 543 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 ZFYP08048 801 aaPredicted RBP8.77□□□□□ -1.01
GYPB-206ENST00000506516 PDE6AP16499 860 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 EMP3P54852 163 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 UBE3CQ15386 1083 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 TSHZ3Q63HK5 1081 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 MIGA2Q7L4E1 593 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 ADGRA1Q86SQ6 560 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 ZFPM1Q8IX07 1006 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 MIGA1Q8NAN2 632 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 EDC3Q96F86 508 aaKnown RBP8.77□□□□□ -1.01
GYPB-206ENST00000506516 CSRNP1Q96S65 589 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 ZNF341Q9BYN7 854 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 DHX36Q9H2U1 1008 aaKnown RBP8.77□□□□□ -1.01
GYPB-206ENST00000506516 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 STAP2Q9UGK3 403 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 FZD1Q9UP38 647 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 CSADQ9Y600 493 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 MYH13Q9UKX3 1938 aa8.77□□□□□ -1.01
GYPB-206ENST00000506516 RPAP1Q9BWH6 1393 aaPredicted RBP8.76□□□□□ -1.01
GYPB-206ENST00000506516 POLR2AP24928 1970 aaKnown RBP8.76□□□□□ -1.01
GYPB-206ENST00000506516 AOC2O75106 756 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 SLC10A3P09131 477 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 ADD2P35612 726 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 PDE1AP54750 535 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 DYNLL1P63167 89 aaKnown RBP8.76□□□□□ -1.01
GYPB-206ENST00000506516 KBTBD3Q8NAB2 608 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 OTUD7AQ8TE49 926 aaPredicted RBP8.76□□□□□ -1.01
GYPB-206ENST00000506516 AIDAQ96BJ3 306 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 OSBPL5Q9H0X9 879 aaPredicted RBP8.76□□□□□ -1.01
GYPB-206ENST00000506516 ZSWIM6Q9HCJ5 1215 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 DDX4Q9NQI0 724 aaKnown RBP8.76□□□□□ -1.01
GYPB-206ENST00000506516 PI4KBQ9UBF8 816 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 TRPM7Q96QT4 1865 aa8.76□□□□□ -1.01
GYPB-206ENST00000506516 TCRBV5S4A2TA0A5A2 114 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 DDTLA6NHG4 134 aaPredicted RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 FAM155AB1AL88 458 aaPredicted RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 RNF113AO15541 343 aaKnown RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 ZBTB48P10074 688 aaPredicted RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 INHBEP58166 350 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 KIF23Q02241 960 aaPredicted RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 MAP3K10Q02779 954 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms