RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KLHL23Q8NBE8 558 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 BTBD6Q96KE9 485 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 DNAJC7Q99615 494 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 TM9SF2Q99805 663 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 TNKS2Q9H2K2 1166 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 STARD13Q9Y3M8 1113 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 TACC3Q9Y6A5 838 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 PRR36Q9H6K5 1346 aa4.65□□□□□ -1.67
TRAPPC11-205ENST00000506426 HTR3BO95264 441 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 ALBP02768 609 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 EPXP11678 715 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 PDE4BQ07343 736 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 RASGRF1Q13972 1273 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 PDE3AQ14432 1141 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 INPP5AQ14642 412 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 RNF187Q5TA31 235 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 ELMO3Q96BJ8 720 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 PLPPR2Q96GM1 343 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 CCDC86Q9H6F5 360 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 MAPK8IP1Q9UQF2 711 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 SLC12A7Q9Y666 1083 aa4.64□□□□□ -1.67
TRAPPC11-205ENST00000506426 A0A1W2PQH9 124 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 MEIS3P2A8K0S8 358 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 M0R082 166 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 GNB5O14775 395 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZNF862O60290 1169 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 DDAH1O94760 285 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 ECEL1O95672 775 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 SLFN14P0C7P3 912 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 GUCY2CP25092 1073 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 CDK8P49336 464 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 DGKGP49619 791 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 PLEKHG4Q58EX7 1191 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 MSL1Q68DK7 614 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 INTS3Q68E01 1043 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 LRFN4Q6PJG9 635 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 RUFY4Q6ZNE9 571 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 MAP4K3Q8IVH8 894 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 LILRB2Q8N423 598 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZNF417Q8TAU3 575 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 SH3TC2Q8TF17 1288 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 TMEM40Q8WWA1 233 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 APPBP2Q92624 585 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 KLHDC7BQ96G42 594 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZNF587Q96SQ5 575 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 NRSN2Q9GZP1 204 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 ANTXR1Q9H6X2 564 aa4.63□□□□□ -1.67
TRAPPC11-205ENST00000506426 SCO2A0A1W2PP80 73 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 CDC45O75419 566 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 GJB6O95452 261 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 SELPP16109 830 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 LIG1P18858 919 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 PLCG1P19174 1290 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 IBSPP21815 317 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 KIF4BQ2VIQ3 1234 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 MTERF2Q49AM1 385 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 CYFIP1Q7L576 1253 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 TTC6Q86TZ1 520 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 HOMER1Q86YM7 354 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 FAM178BQ8IXR5 827 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 TAB3Q8N5C8 712 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 MICAL1Q8TDZ2 1067 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 DCAF11Q8TEB1 546 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 CARD10Q9BWT7 1032 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 USP26Q9BXU7 913 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 SLKQ9H2G2 1235 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 PRDM6Q9NQX0 595 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 FANCLQ9NW38 375 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 GMIPQ9P107 970 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 REV1Q9UBZ9 1251 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 CORINQ9Y5Q5 1042 aa4.62□□□□□ -1.67
TRAPPC11-205ENST00000506426 BICRAQ9NZM4 1560 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 SLC22A31A6NKX4 558 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 DCDC2CA8MYV0 355 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 PPP1R12AO14974 1030 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 NLRP12P59046 1061 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 PTPROQ16827 1216 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 TAF7LQ5H9L4 462 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 TMEM201Q5SNT2 666 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 C6orf15Q6UXA7 325 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 CHSY3Q70JA7 882 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 NLRC3Q7RTR2 1065 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 ALYREFQ86V81 257 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 ZCRB1Q8TBF4 217 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 ATG4CQ96DT6 458 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 TRIM11Q96F44 468 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 WDR89Q96FK6 387 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 TMX1Q9H3N1 280 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 RAD18Q9NS91 495 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 ADAM30Q9UKF2 790 aa4.61□□□□□ -1.67
TRAPPC11-205ENST00000506426 hCG_2014768A0A024R1R8 64 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 ESYT3A0FGR9 886 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 PRAMEF27A3QJZ7 478 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 AOC2O75106 756 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 PGRP06401 933 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 CTSBP07858 339 aa4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 NME1P15531 152 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-205ENST00000506426 GRK4P32298 578 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms