RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ARMC5Q96C12 935 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 KIF1BPQ96EK5 621 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC85AQ96PX6 553 aaPredicted RBP7.15□□□□□ -1.27
SCLT1-207ENST00000506233 RBCK1Q9BYM8 510 aa7.15□□□□□ -1.27
SCLT1-207ENST00000506233 ALDH8A1Q9H2A2 487 aaPredicted RBP7.15□□□□□ -1.27
SCLT1-207ENST00000506233 PAPPA2Q9BXP8 1791 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 MYH2Q9UKX2 1941 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 A0A0U1RQG5 324 aaPredicted RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 SNAP23O00161 211 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 EPB41L2O43491 1005 aaKnown RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 SUSD4Q5VX71 490 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 PI16Q6UXB8 463 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 ZSWIM6Q9HCJ5 1215 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 LMBRD1Q9NUN5 540 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 K7ELQ4 463 aaPredicted RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 CIAO1O76071 339 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 VPS72Q15906 364 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 RAVER1Q8IY67 606 aaKnown RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 STRN4Q9NRL3 753 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 DDX41Q9UJV9 622 aaKnown RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 INPP5FQ9Y2H2 1132 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 HTTP42858 3142 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 NAV1Q8NEY1 1877 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 M0R2C6 588 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 SURF6O75683 361 aaKnown RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 ADD1P35611 737 aaKnown RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 PROX2Q3B8N5 592 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 ADGRA1Q86SQ6 560 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC8Q9H0W5 538 aaPredicted RBP7.14□□□□□ -1.27
SCLT1-207ENST00000506233 GREM2Q9H772 168 aa7.14□□□□□ -1.27
SCLT1-207ENST00000506233 AMPD3Q01432 767 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 NMIQ13287 307 aaPredicted RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC102BQ68D86 513 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 ZBTB38Q8NAP3 1195 aaPredicted RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC191Q8NCU4 936 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 DDX54Q8TDD1 881 aaKnown RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 METTL5Q9NRN9 209 aaKnown RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 ERC2O15083 957 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 PCCAP05165 728 aaPredicted RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 ANAPC15P60006 121 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 FAM26DQ5JW98 314 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 LMBR1LQ6UX01 489 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 TMX3Q96JJ7 454 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 RGS17Q9UGC6 210 aaPredicted RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 SH3TC1Q8TE82 1336 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 DNAH12Q6ZR08 3092 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 WEE1P30291 646 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 MCM4P33991 863 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 EXOSC10Q01780 885 aaKnown RBP7.13□□□□□ -1.27
SCLT1-207ENST00000506233 EML3Q32P44 896 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC129Q6ZRS4 1044 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 CFHR5Q9BXR6 569 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 GPR108Q9NPR9 543 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 TPCN1Q9ULQ1 816 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 CARMIL3Q8ND23 1372 aa7.13□□□□□ -1.27
SCLT1-207ENST00000506233 MCAMP43121 646 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 SEC13P55735 322 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 TIMM10P62072 90 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 FAM89AQ96GI7 184 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 SRA1Q9HD15 236 aaKnown RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 NUDT7P0C024 238 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 HSD3B2P26439 372 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 DEKP35659 375 aaKnown RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 SLKQ9H2G2 1235 aaPredicted RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 ZNF804BA4D1E1 1349 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 A0A087WZG4 1122 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 F12P00748 615 aaPredicted RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 CRKLP46109 303 aaKnown RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 ARID5AQ03989 594 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 FOXD4L6Q3SYB3 417 aaPredicted RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 FOXD4L3Q6VB84 417 aaPredicted RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 FBXL16Q8N461 479 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 OSBP2Q969R2 916 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
SCLT1-207ENST00000506233 ECHDC1Q9NTX5 307 aa7.12□□□□□ -1.27
SCLT1-207ENST00000506233 PPFIA4O75335 1185 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 NEFMP07197 916 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 HSP90AB1P08238 724 aaKnown RBP7.11□□□□□ -1.27
SCLT1-207ENST00000506233 CYP21A2P08686 494 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 EVCP57679 992 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 ANTXR2P58335 489 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.11□□□□□ -1.27
SCLT1-207ENST00000506233 ARFGEF1Q9Y6D6 1849 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 ERVV-1B6SEH8 477 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 SLC27A2O14975 620 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 KLRK1P26718 216 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 GTF2IP78347 998 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 ME3Q16798 604 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCLT1-207ENST00000506233 RNPC3Q96LT9 517 aaKnown RBP7.11□□□□□ -1.27
SCLT1-207ENST00000506233 DDX56Q9NY93 547 aaKnown RBP7.11□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC171Q6TFL3 1326 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 PDE6BP35913 854 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 AK2P54819 239 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 SF3B2Q13435 895 aaKnown RBP7.11□□□□□ -1.27
SCLT1-207ENST00000506233 HINFPQ9BQA5 517 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 FUCA2Q9BTY2 467 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms