RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 PPP2R5BQ15173 497 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 IGDCC4Q8TDY8 1250 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 MXD3Q9BW11 206 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 KCNQ5Q9NR82 932 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 FOCADQ5VW36 1801 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 PSMD14O00487 310 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 RAD17O75943 681 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 GJB2P29033 226 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 EIF6P56537 245 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 CIAPIN1Q6FI81 312 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 CDC42EP5Q6NZY7 148 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 FAM184AQ8NB25 1140 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 DHX36Q9H2U1 1008 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 ATP6V1DQ9Y5K8 247 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 SLC12A7Q9Y666 1083 aa14.09□□□□□ -0.15
POLR2J3-211ENST00000506060 TSPY2A6NKD2 308 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 ZBTB43O43298 467 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 CALM1P0DP23 149 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 CALM2P0DP24 149 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 CALM3P0DP25 149 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 RPS12P25398 132 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 COL9A3Q14050 684 aaPredicted RBP14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 DLGAP5Q15398 846 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 APOBEC3HQ6NTF7 200 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 ZSCAN10Q96SZ4 725 aaPredicted RBP14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 LY9Q9HBG7 655 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 SWAP70Q9UH65 585 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 SAP30BPQ9UHR5 308 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
POLR2J3-211ENST00000506060 ZNF646O15015 1829 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 NFKBIEO00221 500 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 STX6O43752 255 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 CYP2D6P10635 497 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 SCRN1Q12765 414 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 PICALMQ13492 652 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 NFKBIBQ15653 356 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 CFAP100Q494V2 611 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 LARP1BQ659C4 914 aaKnown RBP14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 APOA5Q6Q788 366 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 C16orf86Q6ZW13 317 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 TNPO1Q92973 898 aaKnown RBP14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 IDI2Q9BXS1 227 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 TNKSO95271 1327 aa14.07□□□□□ -0.16
POLR2J3-211ENST00000506060 GOLGA8AA7E2F4 631 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 MYO1BO43795 1136 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 ENTPD3O75355 529 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 PRDM1O75626 825 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 WDHD1O75717 1129 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 BRD1O95696 1058 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 TSPY3P0CV98 308 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 TSPY8P0CW00 308 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 CCT2P78371 535 aaKnown RBP14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 CLEC17AQ6ZS10 378 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 NLGN2Q8NFZ4 835 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 GMLQ99445 158 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 TRIM34Q9BYJ4 488 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 OSBPL5Q9H0X9 879 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 TCP11L1Q9NUJ3 509 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
POLR2J3-211ENST00000506060 DDX60LQ5H9U9 1706 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 SYT1P21579 422 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 CDK8P49336 464 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 TFAP4Q01664 338 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 CXCL9Q07325 125 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 DGKHQ86XP1 1220 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 MTMR14Q8NCE2 650 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 EHD4Q9H223 541 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 GPHNQ9NQX3 736 aaPredicted RBP14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 SERPINB13Q9UIV8 391 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 TACC3Q9Y6A5 838 aa14.05□□□□□ -0.16
POLR2J3-211ENST00000506060 PTPDC1A2A3K4 754 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 H3BQV1 296 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 DDAH1O94760 285 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 ZSCAN22P10073 491 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 PLCD1P51178 756 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 ST3GAL1Q11201 340 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 SEC23AQ15436 765 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 RTN1Q16799 776 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 IFFO2Q5TF58 517 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 FKBP1CQ5VVH2 108 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 MICU3Q86XE3 530 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 ZSCAN29Q8IWY8 852 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-211ENST00000506060 ENAHQ8N8S7 591 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms