RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 BMP6P22004 513 aa8.76□□□□□ -1.01
PPARGC1A-204ENST00000506055 PDE4BQ07343 736 aa8.76□□□□□ -1.01
PPARGC1A-204ENST00000506055 SDR42E1Q8WUS8 393 aa8.76□□□□□ -1.01
PPARGC1A-204ENST00000506055 FEZ1Q99689 392 aa8.76□□□□□ -1.01
PPARGC1A-204ENST00000506055 UTP14AQ9BVJ6 771 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-204ENST00000506055 KIF2AO00139 706 aaPredicted RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 CBFA2T2O43439 604 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 IGSF3O75054 1194 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 SLU7O95391 586 aaKnown RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 IGHMBP2P38935 993 aaKnown RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 ELF2Q15723 593 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 GRAMD1CQ8IYS0 662 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 CRACR2BQ8N4Y2 399 aaPredicted RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 FANCBQ8NB91 859 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 UBAC1Q9BSL1 405 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 CABP5Q9NP86 173 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 HOOK1Q9UJC3 728 aaKnown RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 PCDHB6Q9Y5E3 794 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 FAM237AA0A1B0GTK4 181 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 PSDA5PKW4 1024 aaPredicted RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 WTIPA6NIX2 430 aaPredicted RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 SMIM22K7EJ46 135 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 TOP1P11387 765 aaKnown RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 GNAT2P19087 354 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 ZNF827Q17R98 1081 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 KMT5BQ4FZB7 885 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 CCDC152Q4G0S7 254 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 ADGRA1Q86SQ6 560 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 STAG1Q8WVM7 1258 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 ACSBG1Q96GR2 724 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 OGFRQ9NZT2 677 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 PRDM4Q9UKN5 801 aa8.75□□□□□ -1.01
PPARGC1A-204ENST00000506055 STK36Q9NRP7 1315 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 hCG_1642624A0A1W2PR95 340 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 DEXIO95424 95 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 CYP7A1P22680 504 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 EIF5P55010 431 aaKnown RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 CHRNDQ07001 517 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 PPARAQ07869 468 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 DMTNQ08495 405 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 POSTNQ15063 836 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 RILPL1Q5EBL4 403 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 ZNF654Q8IZM8 581 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 ERO1AQ96HE7 468 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 AK7Q96M32 723 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 FOXP1Q9H334 677 aaPredicted RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 SERTAD1Q9UHV2 236 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 FBXO2Q9UK22 296 aaPredicted RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 NIP7Q9Y221 180 aaKnown RBP eCLIP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 LRP6O75581 1613 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 ITGB4P16144 1822 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 MYH3P11055 1940 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 CCDC196A0A1B0GTZ2 297 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 CRKLP46109 303 aaKnown RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 DHX8Q14562 1220 aaKnown RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 USP49Q70CQ1 688 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 VSTM4Q8IW00 320 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 TMTC2Q8N394 836 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 RAI14Q9P0K7 980 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 DNAI1Q9UI46 699 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 MAN1B1Q9UKM7 699 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 ZHX1Q9UKY1 873 aaPredicted RBP8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 NUP98P52948 1817 aa8.74□□□□□ -1.01
PPARGC1A-204ENST00000506055 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 PTPREP23469 700 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 GYG1P46976 350 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 AKAP17AQ02040 695 aaKnown RBP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 ERCC6LQ2NKX8 1250 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 LRRN4CLQ8ND94 238 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 SMARCE1Q969G3 411 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 CSRNP2Q9H175 543 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 RNF41Q9H4P4 317 aaPredicted RBP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 CCDC87Q9NVE4 849 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 DDX41Q9UJV9 622 aaKnown RBP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 SLIT2O94813 1529 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 MAGEB6P1A0A0J9YX57 407 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 PRDM1O75626 825 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 INTS13Q9NVM9 706 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 VPS54Q9P1Q0 977 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 NFE2L3Q9Y4A8 694 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 ABCA3Q99758 1704 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 TNKSO95271 1327 aa8.73□□□□□ -1.01
PPARGC1A-204ENST00000506055 CYP2D7A0A087X1C5 515 aa8.72□□□□□ -1.01
PPARGC1A-204ENST00000506055 FAM205CA6NFA0 338 aa8.72□□□□□ -1.01
PPARGC1A-204ENST00000506055 KCNJ6P48051 423 aa8.72□□□□□ -1.01
PPARGC1A-204ENST00000506055 ADKP55263 362 aaKnown RBP8.72□□□□□ -1.01
PPARGC1A-204ENST00000506055 ETF1P62495 437 aaKnown RBP8.72□□□□□ -1.01
PPARGC1A-204ENST00000506055 ESR2Q92731 530 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms