RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 CETPP11597 493 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 ADD2P35612 726 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 USP5P45974 858 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 CCL15Q16663 113 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 ZSCAN25Q6NSZ9 544 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 PTPN18Q99952 460 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 PICK1Q9NRD5 415 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 CDK5RAP2Q96SN8 1893 aa13.8□□□□□ -0.2
KDM3B-203ENST00000505756 FAM196BA6NMK8 535 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 ERC2O15083 957 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 IGHDP01880 384 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 HLA-DOAP06340 250 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 SLURP2P0DP57 97 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 UBE3CQ15386 1083 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 TSHZ3Q63HK5 1081 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 METTL16Q86W50 562 aaKnown RBP13.79□□□□□ -0.2
KDM3B-203ENST00000505756 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
KDM3B-203ENST00000505756 PALD1Q9ULE6 856 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 KCNH4Q9UQ05 1017 aa13.79□□□□□ -0.2
KDM3B-203ENST00000505756 GPR25O00155 361 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 PTPRAP18433 802 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 MX1P20591 662 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 CRACR2BQ8N4Y2 399 aaPredicted RBP13.78□□□□□ -0.2
KDM3B-203ENST00000505756 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
KDM3B-203ENST00000505756 ZCCHC17Q9NP64 241 aaKnown RBP13.78□□□□□ -0.2
KDM3B-203ENST00000505756 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
KDM3B-203ENST00000505756 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 DOCK1Q14185 1865 aa13.78□□□□□ -0.2
KDM3B-203ENST00000505756 CXCL11O14625 94 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 SIPA1L1O43166 1804 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.21
KDM3B-203ENST00000505756 CAP2P40123 477 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 LCORLQ8N3X6 602 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 PI4K2BQ8TCG2 481 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.21
KDM3B-203ENST00000505756 ZNF296Q8WUU4 475 aaPredicted RBP13.77□□□□□ -0.21
KDM3B-203ENST00000505756 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 R3HDMLQ9H3Y0 253 aa13.77□□□□□ -0.21
KDM3B-203ENST00000505756 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 CRHR2Q13324 411 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 SLFNL1Q499Z3 407 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 TBC1D2Q9BYX2 928 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 EHD4Q9H223 541 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 DNAJC18Q9H819 358 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 ARMT1Q9H993 441 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 AFG3L2Q9Y4W6 797 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 CASP8AP2Q9UKL3 1982 aa13.76□□□□□ -0.21
KDM3B-203ENST00000505756 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
KDM3B-203ENST00000505756 FKTNO75072 461 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 MBD4O95243 580 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
KDM3B-203ENST00000505756 RRP1BQ14684 758 aaKnown RBP13.75□□□□□ -0.21
KDM3B-203ENST00000505756 TAF1CQ15572 869 aaPredicted RBP13.75□□□□□ -0.21
KDM3B-203ENST00000505756 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
KDM3B-203ENST00000505756 ANKRD23Q86SG2 305 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 ZFYVE28Q9HCC9 887 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 GINM1Q9NU53 330 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 SERPINB13Q9UIV8 391 aa13.75□□□□□ -0.21
KDM3B-203ENST00000505756 MYH1P12882 1939 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 MYH7P12883 1935 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 A0A0G2JLL6 359 aaPredicted RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 CHGBP05060 677 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 POLR3DP05423 398 aaPredicted RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 ASNSP08243 561 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 DGKZQ13574 1117 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 MOGSQ13724 837 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 FASTKD5Q7L8L6 764 aaKnown RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 PRRT2Q7Z6L0 340 aaPredicted RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 CTU1Q7Z7A3 348 aaKnown RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 DCP1AQ9NPI6 582 aaPredicted RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 ATP8A2Q9NTI2 1148 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
KDM3B-203ENST00000505756 STAP2Q9UGK3 403 aa13.74□□□□□ -0.21
KDM3B-203ENST00000505756 TRIM75PA6NK02 468 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 USP17L5A8MUK1 530 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
KDM3B-203ENST00000505756 PLCD1P51178 756 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 ZNF280CQ8ND82 737 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 APPBP2Q92624 585 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 LNPKQ9C0E8 428 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 AS3MTQ9HBK9 375 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 TAOK2Q9UL54 1235 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
KDM3B-203ENST00000505756 ATAD5Q96QE3 1844 aa13.72□□□□□ -0.21
KDM3B-203ENST00000505756 PDHXO00330 501 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms