RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 PRRT2Q7Z6L0 340 aaPredicted RBP7.27□□□□□ -1.25
GYPB-205ENST00000505583 ZSCAN29Q8IWY8 852 aaPredicted RBP7.27□□□□□ -1.25
GYPB-205ENST00000505583 RAET1EQ8TD07 263 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 XAGE2Q96GT9 111 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 UNC93B1Q9H1C4 597 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 PLXNB2O15031 1838 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 MROH7-TTC4A0A0A0MT08 1334 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 GPR75-ASB3A0A0A6YYF3 556 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 TRIM75PA6NK02 468 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 SRGAP3O43295 1099 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 GJB1P08034 283 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 GJA8P48165 433 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 FLT3LGP49771 235 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 RARSP54136 660 aaKnown RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 TREML2Q5T2D2 321 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 DZIP1Q86YF9 867 aaKnown RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 ZFP91Q96JP5 570 aaPredicted RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 PARK7Q99497 189 aaKnown RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 RNF208Q9H0X6 261 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 PICK1Q9NRD5 415 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 RYDENQ9NUL5 291 aaKnown RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 HMG20BQ9P0W2 317 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 RBM27Q9P2N5 1060 aaKnown RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 FOCADQ5VW36 1801 aa7.26□□□□□ -1.25
GYPB-205ENST00000505583 PDS5AQ29RF7 1337 aaKnown RBP7.26□□□□□ -1.25
GYPB-205ENST00000505583 SZT2Q5T011 3432 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 PNMA6EA0A0J9YXQ4 647 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 ADCY3O60266 1144 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 PEX10O60683 326 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 CTNND1O60716 968 aaKnown RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 HOXD10P28358 340 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 FCGRTP55899 365 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 JAG1P78504 1218 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 MTX1Q13505 466 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 SHROOM1Q2M3G4 852 aaPredicted RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 FASTKD5Q7L8L6 764 aaKnown RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 ZGPATQ8N5A5 531 aaKnown RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 ANKRD13CQ8N6S4 541 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 U2AF1L4Q8WU68 220 aaKnown RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 DPF3Q92784 378 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 NSUN4Q96CB9 384 aaKnown RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 NEUROD6Q96NK8 337 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 PRO3102Q9H379 93 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 BIN2Q9UBW5 565 aaPredicted RBP7.25□□□□□ -1.25
GYPB-205ENST00000505583 MAST2Q6P0Q8 1798 aa7.25□□□□□ -1.25
GYPB-205ENST00000505583 TNPO2O14787 897 aaKnown RBP7.24□□□□□ -1.25
GYPB-205ENST00000505583 BCAR3O75815 825 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SGPL1O95470 568 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 INHAP05111 366 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 TRIM27P14373 513 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 MCAMP43121 646 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SPP2Q13103 211 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 MVPQ14764 893 aaKnown RBP7.24□□□□□ -1.25
GYPB-205ENST00000505583 ERICH6Q7L0X2 663 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 ADGRA1Q86SQ6 560 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SPATA5Q8NB90 893 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SLAIN1Q8ND83 568 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SMCR8Q8TEV9 937 aaPredicted RBP7.24□□□□□ -1.25
GYPB-205ENST00000505583 DEFB118Q96PH6 123 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SNRKQ9NRH2 765 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 SLC45A1Q9Y2W3 748 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 STK24Q9Y6E0 443 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 CEP290O15078 2479 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 TRIOBPQ9H2D6 2365 aa7.24□□□□□ -1.25
GYPB-205ENST00000505583 TBC1D12O60347 775 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 FARP2O94887 1054 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 CT47B1P0C2W7 299 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 ARID4AP29374 1257 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 HMGCS2P54868 508 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 TRIM32Q13049 653 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 SPTY2D1Q68D10 685 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 DIS3LQ8TF46 1054 aaKnown RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 ARHGAP45Q92619 1136 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 CLUAP1Q96AJ1 413 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 OSBPL5Q9H0X9 879 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 DNAJC18Q9H819 358 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.23□□□□□ -1.25
GYPB-205ENST00000505583 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
GYPB-205ENST00000505583 DDX60LQ5H9U9 1706 aaKnown RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 COL2A1P02458 1487 aaPredicted RBP7.23□□□□□ -1.25
GYPB-205ENST00000505583 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
GYPB-205ENST00000505583 ZBTB7BO15156 539 aaPredicted RBP7.22□□□□□ -1.25
GYPB-205ENST00000505583 GNAI3P08754 354 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 CAP2P40123 477 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 UBXN2AP68543 259 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 IRF5Q13568 498 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 POTEEQ6S8J3 1075 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 SLF2Q8IX21 1173 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 ZNF280CQ8ND82 737 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 NKX2-3Q8TAU0 364 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 PXYLP1Q8TE99 480 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 PAWRQ96IZ0 340 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms