RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 DCDC2CA8MYV0 355 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 MED26O95402 600 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 PRNPP04156 253 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 VAMP1P23763 118 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 TSNAXIP1Q2TAA8 658 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 CYP27C1Q4G0S4 372 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 C12orf40Q86WS4 652 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 ELMO3Q96BJ8 720 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 PCDHB5Q9Y5E4 795 aa6.33□□□□□ -1.4
LINC01088-202ENST00000505149 RNGTTO60942 597 aaKnown RBP6.32□□□□□ -1.4
LINC01088-202ENST00000505149 LMNB1P20700 586 aa6.32□□□□□ -1.4
LINC01088-202ENST00000505149 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
LINC01088-202ENST00000505149 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
LINC01088-202ENST00000505149 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
LINC01088-202ENST00000505149 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC01088-202ENST00000505149 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
LINC01088-202ENST00000505149 PCMTD2Q9NV79 361 aa6.32□□□□□ -1.4
LINC01088-202ENST00000505149 FAM221AA4D161 298 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 SSTR4P31391 388 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 CAMK2GQ13555 558 aaPredicted RBP6.31□□□□□ -1.4
LINC01088-202ENST00000505149 SEPT6Q14141 434 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 WIPI1Q5MNZ9 446 aaPredicted RBP6.31□□□□□ -1.4
LINC01088-202ENST00000505149 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 DIEXFQ68CQ4 756 aaKnown RBP6.31□□□□□ -1.4
LINC01088-202ENST00000505149 DUSP23Q9BVJ7 150 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 TLR6Q9Y2C9 796 aa6.31□□□□□ -1.4
LINC01088-202ENST00000505149 CYP26A1O43174 497 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 CILPO75339 1184 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 LRIG2O94898 1065 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 HOXA10P31260 410 aaPredicted RBP6.3□□□□□ -1.4
LINC01088-202ENST00000505149 CDK5R2Q13319 367 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 MAP3K11Q16584 847 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 RELL1Q8IUW5 271 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 GATAD2BQ8WXI9 593 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 SSU72Q9NP77 194 aaKnown RBP6.3□□□□□ -1.4
LINC01088-202ENST00000505149 CSADQ9Y600 493 aa6.3□□□□□ -1.4
LINC01088-202ENST00000505149 PRR36Q9H6K5 1346 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 IGF2BP3O00425 579 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC01088-202ENST00000505149 SLBPQ14493 270 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC01088-202ENST00000505149 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 FAM214BQ7L5A3 538 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 HID1Q8IV36 788 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 PICK1Q9NRD5 415 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
LINC01088-202ENST00000505149 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 ROBO2Q9HCK4 1378 aa6.29□□□□□ -1.4
LINC01088-202ENST00000505149 PRAMEF27A3QJZ7 478 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 PF4P02776 101 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 GARTP22102 1010 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 CDK8P49336 464 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 ARMCX6Q7L4S7 300 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 UBE3DQ7Z6J8 389 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
LINC01088-202ENST00000505149 MFSD2AQ8NA29 543 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 LRRC3Q9BY71 257 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 LGR6Q9HBX8 967 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
LINC01088-202ENST00000505149 BSDC1Q9NW68 430 aaPredicted RBP6.28□□□□□ -1.4
LINC01088-202ENST00000505149 CST3P01034 146 aaPredicted RBP6.27□□□□□ -1.41
LINC01088-202ENST00000505149 GBP2P32456 591 aaPredicted RBP6.27□□□□□ -1.41
LINC01088-202ENST00000505149 PDE4BQ07343 736 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 TMEM201Q5SNT2 666 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 C22orf34Q6ZV56 151 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 HS2ST1Q7LGA3 356 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 FBRSQ9HAH7 460 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 KBTBD4Q9NVX7 518 aa6.27□□□□□ -1.41
LINC01088-202ENST00000505149 ZC3H7BQ9UGR2 993 aaKnown RBP6.27□□□□□ -1.41
LINC01088-202ENST00000505149 GREM1O60565 184 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 LEFTY1O75610 366 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 WNT11O96014 354 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 F13A1P00488 732 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 GRK4P32298 578 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 OXCT1P55809 520 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 ETF1P62495 437 aaKnown RBP6.26□□□□□ -1.41
LINC01088-202ENST00000505149 MPP2Q14168 576 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 SLC6A19Q695T7 634 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 BNC2Q6ZN30 1099 aaPredicted RBP6.26□□□□□ -1.41
LINC01088-202ENST00000505149 FAM196AQ6ZSG2 479 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 VSIG10LQ86VR7 867 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 TOP6BLQ8N6T0 577 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 RGS22Q8NE09 1264 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 CCDC39Q9UFE4 941 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 MAPK8IP1Q9UQF2 711 aa6.26□□□□□ -1.41
LINC01088-202ENST00000505149 BPNT1O95861 308 aa6.25□□□□□ -1.41
LINC01088-202ENST00000505149 EOMESO95936 686 aa6.25□□□□□ -1.41
LINC01088-202ENST00000505149 NKG7Q16617 165 aa6.25□□□□□ -1.41
LINC01088-202ENST00000505149 NFXL1Q6ZNB6 911 aa6.25□□□□□ -1.41
LINC01088-202ENST00000505149 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
LINC01088-202ENST00000505149 STK11IPQ8N1F8 1099 aa6.25□□□□□ -1.41
LINC01088-202ENST00000505149 NETO1Q8TDF5 533 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms