RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 XRCC6P12956 609 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSBP2-204ENST00000504985 FBLN1P23142 703 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
SSBP2-204ENST00000504985 ARSDP51689 593 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 RAC1P63000 192 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 TBC1D8BQ0IIM8 1120 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 DGKZQ13574 1117 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 BECN1Q14457 450 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 MSL1Q68DK7 614 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 DMRTC2Q8IXT2 367 aaPredicted RBP8.3□□□□□ -1.08
SSBP2-204ENST00000504985 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 KCNG1Q9UIX4 513 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 MSH6P52701 1360 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 NFAT5O94916 1531 aa8.3□□□□□ -1.08
SSBP2-204ENST00000504985 FSD2A1L4K1 749 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 MSNP26038 577 aaKnown RBP8.29□□□□□ -1.08
SSBP2-204ENST00000504985 GPLD1P80108 840 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 PLAURQ03405 335 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSBP2-204ENST00000504985 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
SSBP2-204ENST00000504985 FBXO11Q86XK2 927 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 COG3Q96JB2 828 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 POLKQ9UBT6 870 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
SSBP2-204ENST00000504985 HSP90AB3PQ58FF7 597 aa8.28□□□□□ -1.08
SSBP2-204ENST00000504985 FAM35AQ86V20 835 aa8.28□□□□□ -1.08
SSBP2-204ENST00000504985 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
SSBP2-204ENST00000504985 PXDNQ92626 1479 aa8.28□□□□□ -1.08
SSBP2-204ENST00000504985 SLIT3O75094 1523 aa8.28□□□□□ -1.08
SSBP2-204ENST00000504985 PHRF1Q9P1Y6 1649 aaKnown RBP8.28□□□□□ -1.08
SSBP2-204ENST00000504985 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
SSBP2-204ENST00000504985 LTN1O94822 1766 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 ATF3P18847 181 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 NRLP54845 237 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 HS1BP3Q53T59 392 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 CTR9Q6PD62 1173 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 KIF3AQ9Y496 699 aa8.27□□□□□ -1.09
SSBP2-204ENST00000504985 SASH3O75995 380 aa8.26□□□□□ -1.09
SSBP2-204ENST00000504985 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
SSBP2-204ENST00000504985 RIPK4P57078 832 aa8.26□□□□□ -1.09
SSBP2-204ENST00000504985 RRS1Q15050 365 aaKnown RBP8.26□□□□□ -1.09
SSBP2-204ENST00000504985 CCDC146Q8IYE0 955 aa8.26□□□□□ -1.09
SSBP2-204ENST00000504985 RBM28Q9NW13 759 aaKnown RBP8.26□□□□□ -1.09
SSBP2-204ENST00000504985 NHSL1Q5SYE7 1610 aa8.26□□□□□ -1.09
SSBP2-204ENST00000504985 RNF123Q5XPI4 1314 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 CPB1P15086 417 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 CALRP27797 417 aaKnown RBP8.25□□□□□ -1.09
SSBP2-204ENST00000504985 XPCQ01831 940 aaPredicted RBP8.25□□□□□ -1.09
SSBP2-204ENST00000504985 LMOD3Q0VAK6 560 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 ZSCAN30Q86W11 494 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 FAM200AQ8TCP9 573 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 TLR7Q9NYK1 1049 aaKnown RBP8.25□□□□□ -1.09
SSBP2-204ENST00000504985 RTCBQ9Y3I0 505 aaKnown RBP8.25□□□□□ -1.09
SSBP2-204ENST00000504985 KCNMB2Q9Y691 235 aa8.25□□□□□ -1.09
SSBP2-204ENST00000504985 USP19O94966 1318 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 MAP3K19Q56UN5 1328 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 ZNF521Q96K83 1311 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 COX20Q5RI15 118 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 TIGD1Q96MW7 591 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 CARD10Q9BWT7 1032 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 CALCOCO1Q9P1Z2 691 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 TNS3Q68CZ2 1445 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 ABCA3Q99758 1704 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 SBNO1A3KN83 1393 aa8.24□□□□□ -1.09
SSBP2-204ENST00000504985 DIAPH1O60610 1272 aaKnown RBP8.23□□□□□ -1.09
SSBP2-204ENST00000504985 DEAF1O75398 565 aaPredicted RBP8.23□□□□□ -1.09
SSBP2-204ENST00000504985 RARAP10276 462 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 MCM5P33992 734 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 IL13P35225 146 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 CCDC173Q0VFZ6 552 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 FKBP5Q13451 457 aaPredicted RBP8.23□□□□□ -1.09
SSBP2-204ENST00000504985 OCLNQ16625 522 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 IGF2-ASQ6U949 168 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 BRINP3Q76B58 766 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 KRT25Q7Z3Z0 450 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 DDX17Q92841 729 aaKnown RBP8.23□□□□□ -1.09
SSBP2-204ENST00000504985 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.096e-6■■■■■ 48.1
SSBP2-204ENST00000504985 FLT4P35916 1363 aa8.23□□□□□ -1.09
SSBP2-204ENST00000504985 UQCRHLA0A096LP55 91 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 DLL1O00548 723 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 APAF1O14727 1248 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 UQCRHP07919 91 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 U2AF1L5P0DN76 240 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 SSR1P43307 286 aaKnown RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 U2AF1Q01081 240 aaKnown RBP eCLIP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
SSBP2-204ENST00000504985 SWI5Q1ZZU3 235 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 SASS6Q6UVJ0 657 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 KRT28Q7Z3Y7 464 aa8.22□□□□□ -1.09
SSBP2-204ENST00000504985 CGNQ9P2M7 1197 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms