RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ZSCAN16Q9H4T2 348 aaPredicted RBP15.56■□□□□ 0.08
LMNA-220ENST00000504687 INCENPQ9NQS7 918 aa15.56■□□□□ 0.08
LMNA-220ENST00000504687 LMBRD1Q9NUN5 540 aa15.56■□□□□ 0.08
LMNA-220ENST00000504687 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
LMNA-220ENST00000504687 TTF2Q9UNY4 1162 aaKnown RBP15.56■□□□□ 0.08
LMNA-220ENST00000504687 CD2APQ9Y5K6 639 aa15.56■□□□□ 0.08
LMNA-220ENST00000504687 SLC12A7Q9Y666 1083 aa15.56■□□□□ 0.08
LMNA-220ENST00000504687 MYO3BQ8WXR4 1341 aa15.56■□□□□ 0.08
LMNA-220ENST00000504687 FLT1P17948 1338 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 CCDC196A0A1B0GTZ2 297 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 CCDC69A6NI79 296 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 FDPSP14324 419 aaKnown RBP15.55■□□□□ 0.08
LMNA-220ENST00000504687 METAP2P50579 478 aaKnown RBP eCLIP15.55■□□□□ 0.08
LMNA-220ENST00000504687 CCT2P78371 535 aaKnown RBP15.55■□□□□ 0.08
LMNA-220ENST00000504687 NTRK3Q16288 839 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 KLHL40Q2TBA0 621 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 SYNE3Q6ZMZ3 975 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 TEX11Q8IYF3 940 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 FAM184AQ8NB25 1140 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 TGFBRAP1Q8WUH2 860 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 SERPINA10Q9UK55 444 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 TCHHQ07283 1943 aa15.55■□□□□ 0.08
LMNA-220ENST00000504687 COL2A1P02458 1487 aaPredicted RBP15.54■□□□□ 0.08
LMNA-220ENST00000504687 TNKSO95271 1327 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 CYP2D7A0A087X1C5 515 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 C21orf2O43822 256 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 USP17L8P0C7I0 530 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 CALM1P0DP23 149 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 CALM2P0DP24 149 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 CALM3P0DP25 149 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 CSPP1Q1MSJ5 1256 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 ATL3Q6DD88 541 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 MCTP1Q6DN14 999 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 DBNDD1Q9H9R9 158 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 NCOA5Q9HCD5 579 aaKnown RBP15.54■□□□□ 0.08
LMNA-220ENST00000504687 FAM217BQ9NTX9 383 aaPredicted RBP15.54■□□□□ 0.08
LMNA-220ENST00000504687 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
LMNA-220ENST00000504687 CPLX1O14810 134 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 DDAH1O94760 285 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 IFNAR1P17181 557 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 MMP14P50281 582 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 AOC3Q16853 763 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
LMNA-220ENST00000504687 APOBEC3HQ6NTF7 200 aaKnown RBP15.53■□□□□ 0.08
LMNA-220ENST00000504687 C16orf86Q6ZW13 317 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 DGKHQ86XP1 1220 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 ENAHQ8N8S7 591 aaPredicted RBP15.53■□□□□ 0.08
LMNA-220ENST00000504687 TOMM22Q9NS69 142 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
LMNA-220ENST00000504687 PLIN4Q96Q06 1357 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 LTBP3Q9NS15 1303 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 WDHD1O75717 1129 aaPredicted RBP15.52■□□□□ 0.08
LMNA-220ENST00000504687 CRKP46108 304 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 NOVP48745 357 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 NFXL1Q6ZNB6 911 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 CDC37L1Q7L3B6 337 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 ZNF654Q8IZM8 581 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 SENP2Q9HC62 589 aa15.52■□□□□ 0.08
LMNA-220ENST00000504687 ELP1O95163 1332 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
LMNA-220ENST00000504687 GOLGA8AA7E2F4 631 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 SMIM22K7EJ46 135 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 RANBP6O60518 1105 aaKnown RBP15.51■□□□□ 0.07
LMNA-220ENST00000504687 MBD3O95983 291 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 POLR3DP05423 398 aaPredicted RBP15.51■□□□□ 0.07
LMNA-220ENST00000504687 CYP2D6P10635 497 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 CDC27P30260 824 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 GABPAQ06546 454 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 RESTQ13127 1097 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 TTC6Q86TZ1 520 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 IDI2Q9BXS1 227 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 EHD4Q9H223 541 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
LMNA-220ENST00000504687 ORC3Q9UBD5 711 aaPredicted RBP15.51■□□□□ 0.07
LMNA-220ENST00000504687 MYH8P13535 1937 aa15.51■□□□□ 0.07
LMNA-220ENST00000504687 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
LMNA-220ENST00000504687 YDJCA8MPS7 323 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 H3BQV1 296 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 FMNL1O95466 1100 aaPredicted RBP15.5■□□□□ 0.07
LMNA-220ENST00000504687 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
LMNA-220ENST00000504687 PLCD1P51178 756 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 TROAPQ12815 778 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 RTN1Q16799 776 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
LMNA-220ENST00000504687 IFIT1BQ5T764 474 aaKnown RBP15.5■□□□□ 0.07
LMNA-220ENST00000504687 IFFO2Q5TF58 517 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 CDC42EP5Q6NZY7 148 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 MICU3Q86XE3 530 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 MAPKAPK5Q8IW41 473 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 FANCBQ8NB91 859 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 FBXO18Q8NFZ0 1043 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 WASF1Q92558 559 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 DDX11Q96FC9 970 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 GMLQ99445 158 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
LMNA-220ENST00000504687 NAP1L2Q9ULW6 460 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms