RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 TCRBV5S4A2TA0A5A2 114 aa25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 FKTNO75072 461 aa25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 DGKZQ13574 1117 aa25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 ZSCAN25Q6NSZ9 544 aa25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 METTL16Q86W50 562 aaKnown RBP25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 TRIM34Q9BYJ4 488 aa25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 TTC41PQ6P2S7 1318 aa25.62■■□□□ 1.69
TRAPPC11-203ENST00000504526 SLURP2P0DP57 97 aa25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 ADD2P35612 726 aa25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 CRHR2Q13324 411 aa25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 CTU1Q7Z7A3 348 aaKnown RBP25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 CRACR2BQ8N4Y2 399 aaPredicted RBP25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 CRNKL1Q9BZJ0 848 aaKnown RBP25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 R3HDMLQ9H3Y0 253 aa25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 ZFYVE28Q9HCC9 887 aa25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 PALD1Q9ULE6 856 aa25.61■■□□□ 1.69
TRAPPC11-203ENST00000504526 CDK5RAP2Q96SN8 1893 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 FAM196BA6NMK8 535 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 ERC2O15083 957 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 TAF1CQ15572 869 aaPredicted RBP25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 FAM43AQ8N2R8 423 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 TBC1D2Q9BYX2 928 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 MCOLN1Q9GZU1 580 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 SUPT16HQ9Y5B9 1047 aaKnown RBP25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 ZHX2Q9Y6X8 837 aa25.6■■□□□ 1.69
TRAPPC11-203ENST00000504526 CAP2P40123 477 aa25.59■■□□□ 1.69
TRAPPC11-203ENST00000504526 UBE3CQ15386 1083 aa25.59■■□□□ 1.69
TRAPPC11-203ENST00000504526 TTC6Q86TZ1 520 aa25.59■■□□□ 1.69
TRAPPC11-203ENST00000504526 SAP30BPQ9UHR5 308 aaKnown RBP25.59■■□□□ 1.69
TRAPPC11-203ENST00000504526 DOCK1Q14185 1865 aa25.59■■□□□ 1.69
TRAPPC11-203ENST00000504526 BTBD19C9JJ37 291 aa25.58■■□□□ 1.69
TRAPPC11-203ENST00000504526 ANKRD23Q86SG2 305 aa25.58■■□□□ 1.69
TRAPPC11-203ENST00000504526 ABHD8Q96I13 439 aa25.58■■□□□ 1.69
TRAPPC11-203ENST00000504526 RWDD1Q9H446 243 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC11-203ENST00000504526 GINM1Q9NU53 330 aa25.58■■□□□ 1.69
TRAPPC11-203ENST00000504526 AFG3L2Q9Y4W6 797 aa25.58■■□□□ 1.69
TRAPPC11-203ENST00000504526 PKN2Q16513 984 aaKnown RBP25.57■■□□□ 1.68
TRAPPC11-203ENST00000504526 ANKRD45Q5TZF3 282 aa25.57■■□□□ 1.68
TRAPPC11-203ENST00000504526 FASTKD5Q7L8L6 764 aaKnown RBP25.57■■□□□ 1.68
TRAPPC11-203ENST00000504526 EXOC6Q8TAG9 804 aa25.57■■□□□ 1.68
TRAPPC11-203ENST00000504526 EHD4Q9H223 541 aa25.57■■□□□ 1.68
TRAPPC11-203ENST00000504526 GLRX3O76003 335 aaKnown RBP25.56■■□□□ 1.68
TRAPPC11-203ENST00000504526 KBTBD3Q8NAB2 608 aa25.56■■□□□ 1.68
TRAPPC11-203ENST00000504526 A0A0G2JLL6 359 aaPredicted RBP25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 ASNSP08243 561 aa25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 MX1P20591 662 aa25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 LRRFIP1Q32MZ4 808 aaKnown RBP25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 PRRT2Q7Z6L0 340 aaPredicted RBP25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 LCORLQ8N3X6 602 aa25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 ERO1AQ96HE7 468 aa25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 DNAJC18Q9H819 358 aa25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 SERPINB13Q9UIV8 391 aa25.55■■□□□ 1.68
TRAPPC11-203ENST00000504526 SIPA1L1O43166 1804 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 MBD4O95243 580 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 SP3Q02447 781 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 MOGSQ13724 837 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 TSHZ3Q63HK5 1081 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 AS3MTQ9HBK9 375 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 ATP8A2Q9NTI2 1148 aa25.54■■□□□ 1.68
TRAPPC11-203ENST00000504526 USP17L5A8MUK1 530 aa25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 PDHXO00330 501 aa25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 TLR2O60603 784 aa25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 POLR3DP05423 398 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 ZFYP08048 801 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 RRP1BQ14684 758 aaKnown RBP25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 ARMT1Q9H993 441 aa25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 MYH1P12882 1939 aa25.53■■□□□ 1.68
TRAPPC11-203ENST00000504526 TRIM75PA6NK02 468 aa25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 CAPN15O75808 1086 aa25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 ZNF280CQ8ND82 737 aa25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 PI4K2BQ8TCG2 481 aa25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 DCP1AQ9NPI6 582 aaPredicted RBP25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 MCM9Q9NXL9 1143 aa25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 TAOK2Q9UL54 1235 aa25.52■■□□□ 1.68
TRAPPC11-203ENST00000504526 ARHGEF6Q15052 776 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 SLC4A8Q2Y0W8 1093 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 TATDN1Q6P1N9 297 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 SMC5Q8IY18 1101 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 OTUD7AQ8TE49 926 aaPredicted RBP25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 SDR42E1Q8WUS8 393 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 DDRGK1Q96HY6 314 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 SALL3Q9BXA9 1300 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 MYH7P12883 1935 aa25.51■■□□□ 1.67
TRAPPC11-203ENST00000504526 SPP2Q13103 211 aa25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 SLFNL1Q499Z3 407 aa25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 GPAT2Q6NUI2 795 aa25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 PARK7Q99497 189 aaKnown RBP25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 WDR18Q9BV38 432 aa25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 SLC45A1Q9Y2W3 748 aa25.5■■□□□ 1.67
TRAPPC11-203ENST00000504526 PHIPQ8WWQ0 1821 aa25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 GADL1Q6ZQY3 521 aa25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 PROCA1Q8NCQ7 364 aaPredicted RBP25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 APPBP2Q92624 585 aa25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 NAV1Q8NEY1 1877 aa25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 DDX60LQ5H9U9 1706 aaKnown RBP25.49■■□□□ 1.67
TRAPPC11-203ENST00000504526 RNF113AO15541 343 aaKnown RBP25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 GDF11O95390 407 aa25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 PLCD1P51178 756 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms