RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SEPT12Q8IYM1 358 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 ZNF295-AS1Q8N0V1 137 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 SMC4Q9NTJ3 1288 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.34□□□□□ -1.39
NIPBL-204ENST00000504430 LUC7L2Q9Y383 392 aaKnown RBP6.34□□□□□ -1.39
NIPBL-204ENST00000504430 TRIM27P14373 513 aa6.34□□□□□ -1.4
NIPBL-204ENST00000504430 PKN3Q6P5Z2 889 aa6.34□□□□□ -1.4
NIPBL-204ENST00000504430 C1orf228Q6PIY5 440 aa6.34□□□□□ -1.4
NIPBL-204ENST00000504430 ENAHQ8N8S7 591 aaPredicted RBP6.34□□□□□ -1.4
NIPBL-204ENST00000504430 ZSWIM6Q9HCJ5 1215 aa6.34□□□□□ -1.4
NIPBL-204ENST00000504430 KLRG2A4D1S0 409 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SOX5P35711 763 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 CLK1P49759 484 aaKnown RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 GTF2A2P52657 109 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 MSS51Q4VC12 460 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 EEPD1Q7L9B9 569 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 CNTD1Q8N815 330 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 ZNF513Q8N8E2 541 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 STRBPQ96SI9 672 aaKnown RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SARGQ9BW04 601 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 NBPF3Q9H094 633 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 EHD4Q9H223 541 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 ANLNQ9NQW6 1124 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 VPS9D1Q9Y2B5 631 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 CBFA2T2O43439 604 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 KPNA6O60684 536 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 LILRA1O75019 489 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 STAT4Q14765 748 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SEPT7Q16181 437 aaKnown RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 WWC2Q6AWC2 1192 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SNX21Q969T3 373 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 C1QTNF2Q9BXJ5 285 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 OSBPL5Q9H0X9 879 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 VTA1Q9NP79 307 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 RIMBP2O15034 1052 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 PICALMQ13492 652 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 PTPN21Q16825 1174 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SLITRK4Q8IW52 837 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 FAM178BQ8IXR5 827 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 SLC7A3Q8WY07 619 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 ATG3Q9NT62 314 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 FAM13BQ9NYF5 915 aa6.33□□□□□ -1.4
NIPBL-204ENST00000504430 MAGED1Q9Y5V3 778 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-204ENST00000504430 UPK3BL1B0FP48 263 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 UPK3BL2E5RIL1 263 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 ENC1O14682 589 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
NIPBL-204ENST00000504430 TSPAN7P41732 249 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 TTBK2Q6IQ55 1244 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 FAM180BQ6P0A1 224 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 PNMA8AQ86V59 439 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-204ENST00000504430 GALNT12Q8IXK2 581 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 OR8H2Q8N162 312 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 ZNF713Q8N859 430 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-204ENST00000504430 NCOA5Q9HCD5 579 aaKnown RBP6.32□□□□□ -1.4
NIPBL-204ENST00000504430 HPS5Q9UPZ3 1129 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 PMM2O15305 246 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 STT3AP46977 705 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 IDH3AP50213 366 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 CDC37Q16543 378 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-204ENST00000504430 HYIQ5T013 277 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 OTUD6BQ8N6M0 293 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 DCBLD2Q96PD2 775 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 FCF1Q9Y324 198 aaKnown RBP6.32□□□□□ -1.4
NIPBL-204ENST00000504430 TLL2Q9Y6L7 1015 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 IGF1RP08069 1367 aa6.32□□□□□ -1.4
NIPBL-204ENST00000504430 PMLP29590 882 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 OAS2P29728 719 aaKnown RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 PUM3Q15397 648 aaKnown RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 JAKMIP3Q5VZ66 844 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 IPCEF1Q8WWN9 437 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 TRIM52Q96A61 297 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 KCNQ5Q9NR82 932 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 DMTF1Q9Y222 760 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 KCNMB2Q9Y691 235 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 RPN1P04843 607 aaKnown RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 CASP2P42575 452 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 WASHC5Q12768 1159 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 PWP1Q13610 501 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 C6orf118Q5T5N4 469 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 NXNQ6DKJ4 435 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 MPRIPQ6WCQ1 1025 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 DTHD1Q6ZMT9 781 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 MMS22LQ6ZRQ5 1243 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 HTR3AP46098 478 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 TAF11Q15544 211 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 GFOD2Q3B7J2 385 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 PLA2G4EQ3MJ16 856 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 TRMT44Q8IYL2 757 aaKnown RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 STAG2Q8N3U4 1231 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms