RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TCIRG1Q13488 830 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 SLC4A8Q2Y0W8 1093 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 PRR7Q8TB68 274 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 SH3TC2Q8TF17 1288 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 EYA3Q99504 573 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 VPS33BQ9H267 617 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 GGA1Q9UJY5 639 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 JAG2Q9Y219 1238 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 NUDCQ9Y266 331 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 LAS1LQ9Y4W2 734 aaKnown RBP4.76□□□□□ -1.65
USP46-205ENST00000504078 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 A0A1B0GUL6 1792 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 LAMB1P07942 1786 aa4.76□□□□□ -1.65
USP46-205ENST00000504078 MAPK8IP3Q9UPT6 1336 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 F8W031 263 aaPredicted RBP4.75□□□□□ -1.65
USP46-205ENST00000504078 IRS4O14654 1257 aaPredicted RBP4.75□□□□□ -1.65
USP46-205ENST00000504078 SPINT1O43278 529 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 VIL1P09327 827 aaKnown RBP4.75□□□□□ -1.65
USP46-205ENST00000504078 USP17L8P0C7I0 530 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 NF2P35240 595 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 MTMR2Q13614 643 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 AGERQ15109 404 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 NFE2L2Q16236 605 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 SLC10A5Q5PT55 438 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 KIAA0825Q8IV33 1275 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 SLC17A8Q8NDX2 589 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 FOXJ1Q92949 421 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 SHISA4Q96DD7 197 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 WNK4Q96J92 1243 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 ZC3H12CQ9C0D7 883 aaKnown RBP4.75□□□□□ -1.65
USP46-205ENST00000504078 ARHGAP39Q9C0H5 1083 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 EFCC1Q9HA90 598 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 PCDHGC3Q9UN70 934 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 PTPN22Q9Y2R2 807 aa4.75□□□□□ -1.65
USP46-205ENST00000504078 PITPNM2Q9BZ72 1349 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 ECM29Q5VYK3 1845 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 USP17L3A6NCW0 530 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 USP17L4A6NCW7 530 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 SOX1O00570 391 aaPredicted RBP4.74□□□□□ -1.65
USP46-205ENST00000504078 WNT10BO00744 389 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 TM4SF4P48230 202 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 FKBP1BP68106 108 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 TRIM26Q12899 539 aaPredicted RBP4.74□□□□□ -1.65
USP46-205ENST00000504078 NEUROD2Q15784 382 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 SLC9C1Q4G0N8 1177 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 HSP90AB3PQ58FF7 597 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 HDGFL1Q5TGJ6 251 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 USP17L1Q7RTZ2 530 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 ARMC9Q7Z3E5 817 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 ALYREFQ86V81 257 aaKnown RBP4.74□□□□□ -1.65
USP46-205ENST00000504078 BPHLQ86WA6 291 aaPredicted RBP4.74□□□□□ -1.65
USP46-205ENST00000504078 CCDC146Q8IYE0 955 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 PNISRQ8TF01 805 aaKnown RBP4.74□□□□□ -1.65
USP46-205ENST00000504078 ZNF333Q96JL9 665 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 GMLQ99445 158 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 ELP3Q9H9T3 547 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 VEZTQ9HBM0 779 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 SZT2Q5T011 3432 aa4.74□□□□□ -1.65
USP46-205ENST00000504078 XDHP47989 1333 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 ARAP2Q8WZ64 1704 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 SNAP23O00161 211 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 HTATSF1O43719 755 aaKnown RBP4.73□□□□□ -1.65
USP46-205ENST00000504078 NEFMP07197 916 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 RPS8P62241 208 aaKnown RBP4.73□□□□□ -1.65
USP46-205ENST00000504078 MTFR1Q15390 333 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 SF3B3Q15393 1217 aaKnown RBP4.73□□□□□ -1.65
USP46-205ENST00000504078 DACT2Q5SW24 774 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 TMC4Q7Z404 712 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 SH3RF1Q7Z6J0 888 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 TXNRD3Q86VQ6 643 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 AGBL3Q8NEM8 1001 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 NEDD1Q8NHV4 660 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 SPIRE2Q8WWL2 714 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 ARMC5Q96C12 935 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 ERO1AQ96HE7 468 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 PLEKHF1Q96S99 279 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 MYD88Q99836 296 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 ISCA1Q9BUE6 129 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 MAP4K5Q9Y4K4 846 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 MED23Q9ULK4 1368 aa4.73□□□□□ -1.65
USP46-205ENST00000504078 MYH3P11055 1940 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 MANSC4A6NHS7 340 aaPredicted RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 BCRP11274 1271 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 SP3Q02447 781 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 TAF1CQ15572 869 aaPredicted RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 NOM1Q5C9Z4 860 aaKnown RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 NBPF12Q5TAG4 269 aaPredicted RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 LYPD8Q6UX82 237 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 Q6ZVU0 165 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 Q7L0L9 218 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 APOBEC3FQ8IUX4 373 aaKnown RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 ANKRD18AQ8IVF6 992 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 CCDC116Q8IYX3 515 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 PLBD2Q8NHP8 589 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 CCER1Q8TC90 406 aaPredicted RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 DPF3Q92784 378 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 OPTNQ96CV9 577 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 SLC10A4Q96EP9 437 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms