RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 IQCA1Q86XH1 822 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 TBC1D10CQ8IV04 446 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
SGCA-204ENST00000504073 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.44
SGCA-204ENST00000504073 SH2B1Q9NRF2 756 aaPredicted RBP17.77■□□□□ 0.44
SGCA-204ENST00000504073 SWAP70Q9UH65 585 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
SGCA-204ENST00000504073 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 ROBO3Q96MS0 1386 aa17.77■□□□□ 0.43
SGCA-204ENST00000504073 ZNF541Q9H0D2 1346 aa17.76■□□□□ 0.43
SGCA-204ENST00000504073 ORC4O43929 436 aa17.76■□□□□ 0.43
SGCA-204ENST00000504073 WDHD1O75717 1129 aaPredicted RBP17.76■□□□□ 0.43
SGCA-204ENST00000504073 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
SGCA-204ENST00000504073 STOX1Q6ZVD7 989 aa17.76■□□□□ 0.43
SGCA-204ENST00000504073 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
SGCA-204ENST00000504073 TMTC2Q8N394 836 aa17.76■□□□□ 0.43
SGCA-204ENST00000504073 PRMT6Q96LA8 375 aaPredicted RBP17.76■□□□□ 0.43
SGCA-204ENST00000504073 UBAC1Q9BSL1 405 aa17.76■□□□□ 0.43
SGCA-204ENST00000504073 TDRD3Q9H7E2 651 aaKnown RBP17.76■□□□□ 0.43
SGCA-204ENST00000504073 SAP30BPQ9UHR5 308 aaKnown RBP17.76■□□□□ 0.43
SGCA-204ENST00000504073 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
SGCA-204ENST00000504073 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 B4E1Z4 1266 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 PRC1O43663 620 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 AK2P54819 239 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 KIF4BQ2VIQ3 1234 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SGCA-204ENST00000504073 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
SGCA-204ENST00000504073 TTC14Q96N46 770 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 VEZTQ9HBM0 779 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 GPRC5DQ9NZD1 345 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 PI4KBQ9UBF8 816 aa17.75■□□□□ 0.43
SGCA-204ENST00000504073 ZNF70Q9UC06 446 aaPredicted RBP17.75■□□□□ 0.43
SGCA-204ENST00000504073 RANBP6O60518 1105 aaKnown RBP17.74■□□□□ 0.43
SGCA-204ENST00000504073 FGRP09769 529 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 Q6ZUG5 572 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 FAM83AQ86UY5 434 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
SGCA-204ENST00000504073 FBXL16Q8N461 479 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 HOOK2Q96ED9 719 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 EHD4Q9H223 541 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 SERPINB13Q9UIV8 391 aa17.74■□□□□ 0.43
SGCA-204ENST00000504073 TSPY2A6NKD2 308 aa17.73■□□□□ 0.43
SGCA-204ENST00000504073 WNT10BO00744 389 aa17.73■□□□□ 0.43
SGCA-204ENST00000504073 KDM4AO75164 1064 aa17.73■□□□□ 0.43
SGCA-204ENST00000504073 EXOSC10Q01780 885 aaKnown RBP17.73■□□□□ 0.43
SGCA-204ENST00000504073 C16orf86Q6ZW13 317 aa17.73■□□□□ 0.43
SGCA-204ENST00000504073 APOBEC3FQ8IUX4 373 aaKnown RBP17.73■□□□□ 0.43
SGCA-204ENST00000504073 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
SGCA-204ENST00000504073 NEDD4P46934 1319 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 ADAMTSL1Q8N6G6 1762 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 CYP2D7A0A087X1C5 515 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SGCA-204ENST00000504073 TCP10Q12799 353 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 RBM26Q5T8P6 1007 aaKnown RBP17.72■□□□□ 0.43
SGCA-204ENST00000504073 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 STK11IPQ8N1F8 1099 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 ZBED3Q96IU2 234 aaPredicted RBP17.72■□□□□ 0.43
SGCA-204ENST00000504073 NBPF3Q9H094 633 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
SGCA-204ENST00000504073 TAF6LQ9Y6J9 622 aa17.72■□□□□ 0.43
SGCA-204ENST00000504073 CLRN2A0PK11 232 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 DHX16O60231 1041 aaKnown RBP17.71■□□□□ 0.43
SGCA-204ENST00000504073 TSPY3P0CV98 308 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 TSPY8P0CW00 308 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 CYP2D6P10635 497 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 CPA1P15085 419 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 NFIAQ12857 509 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 TMEM67Q5HYA8 995 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
SGCA-204ENST00000504073 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
SGCA-204ENST00000504073 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
SGCA-204ENST00000504073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
SGCA-204ENST00000504073 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
SGCA-204ENST00000504073 DDX60LQ5H9U9 1706 aaKnown RBP17.7■□□□□ 0.42
SGCA-204ENST00000504073 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 LIFRP42702 1097 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 CDK8P49336 464 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 WTAPQ15007 396 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 TBC1D10BQ4KMP7 808 aaPredicted RBP17.7■□□□□ 0.42
SGCA-204ENST00000504073 BRF1Q92994 677 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 AGXT2Q9BYV1 514 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
SGCA-204ENST00000504073 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 FAM198AQ9UFP1 575 aa17.7■□□□□ 0.42
SGCA-204ENST00000504073 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
SGCA-204ENST00000504073 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
SGCA-204ENST00000504073 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
SGCA-204ENST00000504073 PLCD1P51178 756 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 CACNB3P54284 484 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 SLC4A8Q2Y0W8 1093 aa17.69■□□□□ 0.42
SGCA-204ENST00000504073 CPLX2Q6PUV4 134 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms