RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
SNF8-203ENST00000504000 TRIM22Q8IYM9 498 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 BAG1Q99933 345 aaPredicted RBP17.17■□□□□ 0.34
SNF8-203ENST00000504000 BCL11BQ9C0K0 894 aaPredicted RBP17.17■□□□□ 0.34
SNF8-203ENST00000504000 CEP131Q9UPN4 1083 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 IFIT3O14879 490 aaKnown RBP17.16■□□□□ 0.34
SNF8-203ENST00000504000 TOB1P50616 345 aaPredicted RBP17.16■□□□□ 0.34
SNF8-203ENST00000504000 MAP3K9P80192 1104 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 AKNAD1Q5T1N1 836 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 MAN1B1Q9UKM7 699 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 SRPRBQ9Y5M8 271 aaKnown RBP17.16■□□□□ 0.34
SNF8-203ENST00000504000 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 STRCP1A6NGW2 1772 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 ANKRD36CQ5JPF3 1778 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 CCDC66A2RUB6 948 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 PDE8AO60658 829 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 DEXIO95424 95 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 PDE4BQ07343 736 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 SART3Q15020 963 aaKnown RBP17.16■□□□□ 0.34
SNF8-203ENST00000504000 TMCO3Q6UWJ1 677 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 NAPBQ9H115 298 aa17.16■□□□□ 0.34
SNF8-203ENST00000504000 PNPLA7Q6ZV29 1317 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 PNMA6AP0CW24 399 aaPredicted RBP17.15■□□□□ 0.34
SNF8-203ENST00000504000 RXRAP19793 462 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
SNF8-203ENST00000504000 TC2NQ8N9U0 490 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 LRRN4CLQ8ND94 238 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 CCDC85AQ96PX6 553 aaPredicted RBP17.15■□□□□ 0.34
SNF8-203ENST00000504000 EPB41L4AQ9HCS5 686 aaPredicted RBP17.15■□□□□ 0.34
SNF8-203ENST00000504000 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
SNF8-203ENST00000504000 ERVV-1B6SEH8 477 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 IRS4O14654 1257 aaPredicted RBP17.14■□□□□ 0.33
SNF8-203ENST00000504000 FANCGO15287 622 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 URI1O94763 535 aaPredicted RBP17.14■□□□□ 0.33
SNF8-203ENST00000504000 PHKA1P46020 1223 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 NR1I3Q14994 352 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 GPR161Q8N6U8 529 aaKnown RBP17.14■□□□□ 0.33
SNF8-203ENST00000504000 NFE2L3Q9Y4A8 694 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 BTBD18B2RXH4 712 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 RTN1Q16799 776 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
SNF8-203ENST00000504000 SPATA5Q8NB90 893 aa17.14■□□□□ 0.33
SNF8-203ENST00000504000 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
SNF8-203ENST00000504000 CHD4Q14839 1912 aa17.13■□□□□ 0.33
SNF8-203ENST00000504000 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
SNF8-203ENST00000504000 IGSF3O75054 1194 aa17.13■□□□□ 0.33
SNF8-203ENST00000504000 CASQ1P31415 396 aa17.13■□□□□ 0.33
SNF8-203ENST00000504000 PANX2Q96RD6 677 aa17.13■□□□□ 0.33
SNF8-203ENST00000504000 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
SNF8-203ENST00000504000 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
SNF8-203ENST00000504000 SOS2Q07890 1332 aaPredicted RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 A0A1B0GTH6 734 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 SEMA3EO15041 775 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 PLCD1P51178 756 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 TUBB4BP68371 445 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 HLFQ16534 295 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 MRFAP1Q9Y605 127 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 MYO5AQ9Y4I1 1855 aaKnown RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 NPHP1O15259 732 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 ACTN4O43707 911 aaKnown RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 SLC5A1P13866 664 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 PLA2G4AP47712 749 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 RSRC2Q7L4I2 434 aaKnown RBP17.12■□□□□ 0.33
SNF8-203ENST00000504000 CARD6Q9BX69 1037 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNF8-203ENST00000504000 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
SNF8-203ENST00000504000 ERICH2A1L162 156 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 FOXN1O15353 648 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 MBD4O95243 580 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 BMP15O95972 392 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNF8-203ENST00000504000 TUBB2AQ13885 445 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 WTAPQ15007 396 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 PIGBQ92521 554 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 RABGGTAQ92696 567 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 TUBB2BQ9BVA1 445 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 RNF26Q9BY78 433 aaPredicted RBP17.11■□□□□ 0.33
SNF8-203ENST00000504000 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
SNF8-203ENST00000504000 TRMT112Q9UI30 125 aaKnown RBP17.11■□□□□ 0.33
SNF8-203ENST00000504000 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms