RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C6orf229H3BNL8 230 aa24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 FMNL1O95466 1100 aaPredicted RBP24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 BAG3O95817 575 aa24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 FTOQ9C0B1 505 aaKnown RBP eCLIP24.85■■□□□ 1.578e-9■□□□□ 8.1
UBE2D3-216ENST00000503742 FAM205AQ6ZU69 1335 aa24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 PRDM1O75626 825 aa24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 CYP2D6P10635 497 aa24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 KIF23Q02241 960 aaPredicted RBP24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 SH3RF3Q8TEJ3 882 aaPredicted RBP24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 RTFDC1Q9BY42 306 aaPredicted RBP24.85■■□□□ 1.57
UBE2D3-216ENST00000503742 KIF28PB7ZC32 967 aa24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 SLC3A2P08195 630 aaKnown RBP24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 CEBPZQ03701 1054 aaKnown RBP24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 SSRP1Q08945 709 aaKnown RBP24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 IQCA1Q86XH1 822 aa24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 CERS3Q8IU89 383 aa24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 FANCBQ8NB91 859 aa24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 TBC1D22AQ8WUA7 517 aa24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 MCM9Q9NXL9 1143 aa24.84■■□□□ 1.57
UBE2D3-216ENST00000503742 CCDC196A0A1B0GTZ2 297 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 PPP2R5BQ15173 497 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 KRT40Q6A162 431 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 NBPF11Q86T75 865 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 MASTLQ96GX5 879 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 SLC26A6Q9BXS9 759 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 RTEL1Q9NZ71 1219 aa24.83■■□□□ 1.57
UBE2D3-216ENST00000503742 USP17L8P0C7I0 530 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 C12orf60Q5U649 245 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 POTEAQ6S8J7 498 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 FAM163AQ96GL9 167 aaPredicted RBP24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 FUCA2Q9BTY2 467 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 CDK5RAP2Q96SN8 1893 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 NAV1Q8NEY1 1877 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 GPR75-ASB3A0A0A6YYF3 556 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 USP5P45974 858 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 PDE4BQ07343 736 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 MFSD14BQ5SR56 506 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 MYSM1Q5VVJ2 828 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 MSL1Q68DK7 614 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 NOL10Q9BSC4 688 aaKnown RBP24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 COA1Q9GZY4 146 aa24.82■■□□□ 1.56
UBE2D3-216ENST00000503742 ROBO3Q96MS0 1386 aa24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 NT5C2P49902 561 aa24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 IFIT1BQ5T764 474 aaKnown RBP24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 CRACR2BQ8N4Y2 399 aaPredicted RBP24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 WASF1Q92558 559 aa24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 DDX19AQ9NUU7 478 aaKnown RBP24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 DACT1Q9NYF0 836 aa24.81■■□□□ 1.56
UBE2D3-216ENST00000503742 POLR3DP05423 398 aaPredicted RBP24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 MPNDQ8N594 471 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 NUP133Q8WUM0 1156 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 PPP1R9BQ96SB3 815 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 POLR3EQ9NVU0 708 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 UBE2Q2LH0YL09 131 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 BICD2Q8TD16 824 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 NUP62CLQ9H1M0 184 aa24.8■■□□□ 1.56
UBE2D3-216ENST00000503742 GAKO14976 1311 aa24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 BTDP43251 543 aa24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 CCDC173Q0VFZ6 552 aa24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 OLFM4Q6UX06 510 aa24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 TRIM22Q8IYM9 498 aa24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 CAMKK2Q96RR4 588 aa24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 ANO8Q9HCE9 1232 aaPredicted RBP24.79■■□□□ 1.56
UBE2D3-216ENST00000503742 GUCY1A2P33402 732 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 TROAPQ12815 778 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 LINC00301Q8NCQ3 95 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 TGFBRAP1Q8WUH2 860 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 RIMBP2O15034 1052 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 NR1I2O75469 434 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 YEATS4O95619 227 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 CATIPQ7Z7H3 387 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 SLF2Q8IX21 1173 aa24.78■■□□□ 1.56
UBE2D3-216ENST00000503742 DDX60LQ5H9U9 1706 aaKnown RBP24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 DDAH1O94760 285 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 DEXIO95424 95 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 U2AF2P26368 475 aaKnown RBP eCLIP24.77■■□□□ 1.563e-9■■■□□ 15
UBE2D3-216ENST00000503742 SLC15A2Q16348 729 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 FAM47AQ5JRC9 791 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 RBM43Q6ZSC3 357 aaKnown RBP24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 ANP32BQ92688 251 aaKnown RBP24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 CLSTN2Q9H4D0 955 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 CLIC4Q9Y696 253 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 QSER1Q2KHR3 1735 aa24.77■■□□□ 1.56
UBE2D3-216ENST00000503742 CALM1P0DP23 149 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 CALM2P0DP24 149 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 CALM3P0DP25 149 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 GTF2IP78347 998 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 FUT2Q10981 343 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 TRIM29Q14134 588 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 EZH2Q15910 746 aaKnown RBP24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 DPP8Q6V1X1 898 aaPredicted RBP24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 RNF214Q8ND24 703 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 ZC3H12CQ9C0D7 883 aaKnown RBP24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 SUGT1Q9Y2Z0 365 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 PLCG2P16885 1265 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 RHBDL3P58872 404 aa24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 RNF26Q9BY78 433 aaPredicted RBP24.76■■□□□ 1.55
UBE2D3-216ENST00000503742 MYH6P13533 1939 aa24.75■■□□□ 1.55
UBE2D3-216ENST00000503742 NMT2O60551 498 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms