RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TOB1P50616 345 aaPredicted RBP28.05■■■□□ 2.08
DDX41-202ENST00000503078 SAFBQ15424 915 aaKnown RBP eCLIP28.05■■■□□ 2.08
DDX41-202ENST00000503078 CNNM1Q9NRU3 951 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 FBXO2Q9UK22 296 aaPredicted RBP28.05■■■□□ 2.08
DDX41-202ENST00000503078 WDR17Q8IZU2 1322 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 CDHR2Q9BYE9 1310 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 TCRBV5S4A2TA0A5A2 114 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 IFNAR1P17181 557 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 SARSP49591 514 aaKnown RBP28.04■■■□□ 2.08
DDX41-202ENST00000503078 TOGARAM2Q6ZUX3 1019 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 VGLL2Q8N8G2 317 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 AIDAQ96BJ3 306 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 GREM2Q9H772 168 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 WWC3Q9ULE0 1092 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 IFIT3O14879 490 aaKnown RBP28.04■■■□□ 2.08
DDX41-202ENST00000503078 MORC3Q14149 939 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 TOM1L2Q6ZVM7 507 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 TTLL11Q8NHH1 800 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 SMARCE1Q969G3 411 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 INCENPQ9NQS7 918 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 ZSWIM5Q9P217 1185 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 MRFAP1Q9Y605 127 aa28.04■■■□□ 2.08
DDX41-202ENST00000503078 POLR2DO15514 142 aaKnown RBP28.03■■■□□ 2.08
DDX41-202ENST00000503078 PRR29P0C7W0 189 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 ADKP55263 362 aaKnown RBP28.03■■■□□ 2.08
DDX41-202ENST00000503078 DIS3L2Q8IYB7 885 aaKnown RBP28.03■■■□□ 2.08
DDX41-202ENST00000503078 SYNE4Q8N205 404 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 GPR161Q8N6U8 529 aaKnown RBP28.03■■■□□ 2.08
DDX41-202ENST00000503078 SERTAD1Q9UHV2 236 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 LRP6O75581 1613 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 ANKRD18BA2A2Z9 1011 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 SEC31AO94979 1220 aaKnown RBP28.03■■■□□ 2.08
DDX41-202ENST00000503078 GRIN1Q05586 938 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 TRIML1Q8N9V2 468 aa28.03■■■□□ 2.08
DDX41-202ENST00000503078 RILPL1Q5EBL4 403 aa28.02■■■□□ 2.08
DDX41-202ENST00000503078 NID2Q14112 1375 aa28.02■■■□□ 2.08
DDX41-202ENST00000503078 ARID4AP29374 1257 aaPredicted RBP28.02■■■□□ 2.08
DDX41-202ENST00000503078 PPP2R3AQ06190 1150 aa28.02■■■□□ 2.08
DDX41-202ENST00000503078 NUTM2AQ8IVF1 878 aaPredicted RBP28.02■■■□□ 2.08
DDX41-202ENST00000503078 KIFC2Q96AC6 838 aa28.02■■■□□ 2.08
DDX41-202ENST00000503078 PATL2C9JE40 543 aaKnown RBP28.01■■■□□ 2.07
DDX41-202ENST00000503078 GUCY1A2P33402 732 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 ZNF579Q8NAF0 562 aaKnown RBP28.01■■■□□ 2.07
DDX41-202ENST00000503078 FOXP1Q9H334 677 aaPredicted RBP28.01■■■□□ 2.07
DDX41-202ENST00000503078 PDE8BO95263 885 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 UQCRFS1P1P0C7P4 283 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 PHKA1P46020 1223 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 RSRC2Q7L4I2 434 aaKnown RBP28.01■■■□□ 2.07
DDX41-202ENST00000503078 TRMT44Q8IYL2 757 aaKnown RBP28.01■■■□□ 2.07
DDX41-202ENST00000503078 IFNL3Q8IZI9 196 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 NAPBQ9H115 298 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 EPB41L4AQ9HCS5 686 aaPredicted RBP28.01■■■□□ 2.07
DDX41-202ENST00000503078 RAI14Q9P0K7 980 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 CALCOCO1Q9P1Z2 691 aa28.01■■■□□ 2.07
DDX41-202ENST00000503078 CTDSPL2Q05D32 466 aa28■■■□□ 2.07
DDX41-202ENST00000503078 ZNF827Q17R98 1081 aa28■■■□□ 2.07
DDX41-202ENST00000503078 CC2D1AQ6P1N0 951 aaPredicted RBP28■■■□□ 2.07
DDX41-202ENST00000503078 TRIM22Q8IYM9 498 aa28■■■□□ 2.07
DDX41-202ENST00000503078 UBXN6Q9BZV1 441 aa28■■■□□ 2.07
DDX41-202ENST00000503078 EPC1Q9H2F5 836 aa28■■■□□ 2.07
DDX41-202ENST00000503078 CNNM2Q9H8M5 875 aa28■■■□□ 2.07
DDX41-202ENST00000503078 KCNJ14Q9UNX9 436 aa28■■■□□ 2.07
DDX41-202ENST00000503078 COL5A2P05997 1499 aaPredicted RBP28■■■□□ 2.07
DDX41-202ENST00000503078 CTSWP56202 376 aa28■■■□□ 2.07
DDX41-202ENST00000503078 TEX35Q5T0J7 233 aa28■■■□□ 2.07
DDX41-202ENST00000503078 TBC1D8O95759 1140 aa27.99■■■□□ 2.07
DDX41-202ENST00000503078 KANK3Q6NY19 840 aa27.99■■■□□ 2.07
DDX41-202ENST00000503078 GIGYF2Q6Y7W6 1299 aaKnown RBP27.99■■■□□ 2.07
DDX41-202ENST00000503078 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.99■■■□□ 2.07
DDX41-202ENST00000503078 NR1I3Q14994 352 aa27.99■■■□□ 2.07
DDX41-202ENST00000503078 MED15Q96RN5 788 aa27.99■■■□□ 2.07
DDX41-202ENST00000503078 KRT23Q9C075 422 aa27.99■■■□□ 2.07
DDX41-202ENST00000503078 SAMSN1Q9NSI8 373 aaKnown RBP27.98■■■□□ 2.07
DDX41-202ENST00000503078 SRPRBQ9Y5M8 271 aaKnown RBP27.98■■■□□ 2.07
DDX41-202ENST00000503078 CHD4Q14839 1912 aa27.98■■■□□ 2.07
DDX41-202ENST00000503078 PLCD1P51178 756 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 AKNAD1Q5T1N1 836 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 NLRP10Q86W26 655 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 GRAMD1CQ8IYS0 662 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 RABGGTAQ92696 567 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 PCDHB6Q9Y5E3 794 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 TACC3Q9Y6A5 838 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 ABCA3Q99758 1704 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 ACTN4O43707 911 aaKnown RBP27.97■■■□□ 2.07
DDX41-202ENST00000503078 SASH3O75995 380 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 IL2RBP14784 551 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 GPTP24298 496 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 ERCC5P28715 1186 aaPredicted RBP27.97■■■□□ 2.07
DDX41-202ENST00000503078 RTN1Q16799 776 aa27.97■■■□□ 2.07
DDX41-202ENST00000503078 DNAJC10Q8IXB1 793 aa27.96■■■□□ 2.07
DDX41-202ENST00000503078 SPATA20Q8TB22 786 aa27.96■■■□□ 2.07
DDX41-202ENST00000503078 DESI2Q9BSY9 194 aa27.96■■■□□ 2.07
DDX41-202ENST00000503078 TEX13AQ9BXU3 409 aaPredicted RBP27.96■■■□□ 2.07
DDX41-202ENST00000503078 A0A1B0GTH6 734 aa27.96■■■□□ 2.07
DDX41-202ENST00000503078 POLR3GO15318 223 aaPredicted RBP27.96■■■□□ 2.07
DDX41-202ENST00000503078 CEP131Q9UPN4 1083 aa27.96■■■□□ 2.07
DDX41-202ENST00000503078 TIAM2Q8IVF5 1701 aa27.95■■■□□ 2.07
DDX41-202ENST00000503078 MBD4O95243 580 aa27.95■■■□□ 2.07
DDX41-202ENST00000503078 DEXIO95424 95 aa27.95■■■□□ 2.07
DDX41-202ENST00000503078 HLFQ16534 295 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms