RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 DPY19L2Q6NUT2 758 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 CENPQQ7L2Z9 268 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 KRT77Q7Z794 578 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 TADA2BQ86TJ2 420 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 RNF168Q8IYW5 571 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 CLASRPQ8N2M8 674 aaKnown RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 GBP7Q8N8V2 638 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 SMYD1Q8NB12 490 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 B4GALNT2Q8NHY0 566 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 UHMK1Q8TAS1 419 aaKnown RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 ZC3H15Q8WU90 426 aaKnown RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 UBXN4Q92575 508 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 KCNN1Q92952 543 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 L3MBTL2Q969R5 705 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 VMP1Q96GC9 406 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 GPATCH3Q96I76 525 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 GSDMAQ96QA5 445 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 RUFY1Q96T51 708 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 SLC39A3Q9BRY0 314 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 MKS1Q9NXB0 559 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 TRMT1Q9NXH9 659 aaKnown RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 ANKIB1Q9P2G1 1089 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 DKK3Q9UBP4 350 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 BIN2Q9UBW5 565 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 PCSK1NQ9UHG2 260 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 BOLA1Q9Y3E2 137 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 NRKQ7Z2Y5 1582 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 PPIP5K1Q6PFW1 1433 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 TRPM1Q7Z4N2 1603 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 VAMP4O75379 141 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 VIL1P09327 827 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 MYCLP1P12525 358 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 ENPP1P22413 925 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 EIF4BP23588 611 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 ZNF131P52739 623 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 CSE1LP55060 971 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 RRP1P56182 461 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 ZC3H6P61129 1189 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 PDE4BQ07343 736 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 ADCY1Q08828 1119 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 NYAP1Q6ZVC0 841 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 SAPCD2Q86UD0 394 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 DZIP1Q86YF9 867 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 SAMD14Q8IZD0 417 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 NDUFAF2Q8N183 169 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 CHCHD4Q8N4Q1 142 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 ABTB2Q8N961 1025 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 N4BP2L2Q92802 583 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 SNX21Q969T3 373 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 CENPTQ96BT3 561 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 NAP1L3Q99457 506 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 TSGA10Q9BZW7 698 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 PDGFDQ9GZP0 370 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 RABEP2Q9H5N1 569 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 SENP2Q9HC62 589 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 CABP2Q9NPB3 220 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 STRN4Q9NRL3 753 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 ZNHIT6Q9NWK9 470 aaKnown RBP7.43□□□□□ -1.22
CLCN3-203ENST00000502998 GABBR1Q9UBS5 961 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 SPATA31A1Q5TZJ5 1347 aa7.43□□□□□ -1.22
CLCN3-203ENST00000502998 NUP188Q5SRE5 1749 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 G3V3G9 751 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 CHUKO15111 745 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 KDM1AO60341 852 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 ZFXP17010 805 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 RPL13P26373 211 aaKnown RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 NEK2P51955 445 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 HDAC4P56524 1084 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 PABPC4Q13310 644 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 PDAP1Q13442 181 aaKnown RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 WTAPQ15007 396 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 LRRC23Q53EV4 343 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 CDCA2Q69YH5 1023 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 ARHGAP22Q7Z5H3 698 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 ZNF784Q8NCA9 323 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 CCDC150Q8NCX0 1101 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 ANKK1Q8NFD2 765 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 EXOC6Q8TAG9 804 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 FRS2Q8WU20 508 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 TEKT4Q8WW24 435 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 RTF1Q92541 710 aaKnown RBP7.42□□□□□ -1.22
CLCN3-203ENST00000502998 CCDC114Q96M63 670 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 NEUROD6Q96NK8 337 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 OSBPL9Q96SU4 736 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 TSPY26PQ9H489 355 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 CHMP3Q9Y3E7 222 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 SLC30A1Q9Y6M5 507 aa7.42□□□□□ -1.22
CLCN3-203ENST00000502998 LMO7Q8WWI1 1683 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 RREB1Q92766 1687 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 BOLA2-SMG1P6H3BVE0 249 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 FESP07332 822 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 GPTP24298 496 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 CCNCP24863 283 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
CLCN3-203ENST00000502998 RANBP1P43487 201 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 ARHGEF6Q15052 776 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 DOK7Q18PE1 504 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 AGAP9Q5VTM2 703 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 DUSP27Q5VZP5 1158 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms