RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PRKCZQ05513 592 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 TFCP2Q12800 502 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 ATF7IPQ6VMQ6 1270 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 FOXP4Q8IVH2 680 aaPredicted RBP7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 ZNF280CQ8ND82 737 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 SMCR8Q8TEV9 937 aaPredicted RBP7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 ZNF384Q8TF68 577 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 U2AF1L4Q8WU68 220 aaKnown RBP7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 WDR18Q9BV38 432 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 RNF208Q9H0X6 261 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 AS3MTQ9HBK9 375 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 PI4KBQ9UBF8 816 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 ABCF2Q9UG63 623 aa7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 COLQQ9Y215 455 aaPredicted RBP7.53□□□□□ -1.2
LSM3P4-201ENST00000502948 MYO5AQ9Y4I1 1855 aaKnown RBP7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 C19orf81C9J6K1 198 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 H0YGN5 161 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 TNPO2O14787 897 aaKnown RBP7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 ADCY3O60266 1144 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 BAG3O95817 575 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 ASNSP08243 561 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 XRCC5P13010 732 aaKnown RBP7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 TRIM27P14373 513 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 FLT3LGP49771 235 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 POLA2Q14181 598 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 SSH3Q8TE77 659 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 GTF3C2Q8WUA4 911 aaPredicted RBP7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 COA7Q96BR5 231 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 MORF4L1Q9UBU8 362 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 TAOK2Q9UL54 1235 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 NR2E3Q9Y5X4 410 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 ALPK3Q96L96 1907 aa7.52□□□□□ -1.21
LSM3P4-201ENST00000502948 MYH1P12882 1939 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 MCAMP43121 646 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 G3BP1Q13283 466 aaKnown RBP eCLIP7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 GPR153Q6NV75 609 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 PPP4R3CPQ6ZMV5 832 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 TRMT44Q8IYL2 757 aaKnown RBP7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 GJD2Q9UKL4 321 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 GABRQQ9UN88 632 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 NOP58Q9Y2X3 529 aaKnown RBP7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 RPTORQ8N122 1335 aa7.51□□□□□ -1.21
LSM3P4-201ENST00000502948 PNMA6EA0A0J9YXQ4 647 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 TRIM75PA6NK02 468 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 FARP2O94887 1054 aaPredicted RBP7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 HMGCRP04035 888 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 INHAP05111 366 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 BMP8BP34820 402 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 BACE1P56817 501 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 ATP8B2P98198 1209 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 SPP2Q13103 211 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 PICALMQ13492 652 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 CCDC158Q5M9N0 1113 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 TREML2Q5T2D2 321 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 GORABQ5T7V8 394 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 MAP3K21Q5TCX8 1036 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 GADL1Q6ZQY3 521 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 DPF3Q92784 378 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 NEUROD6Q96NK8 337 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 NOL10Q9BSC4 688 aaKnown RBP7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 UNC93B1Q9H1C4 597 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 LRP2BPQ9P2M1 347 aa7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.5□□□□□ -1.21
LSM3P4-201ENST00000502948 DDX60LQ5H9U9 1706 aaKnown RBP7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 CEP290O15078 2479 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 KCNA4P22459 653 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 TNNI3KQ59H18 835 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 NAA16Q6N069 864 aaPredicted RBP7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 TATDN1Q6P1N9 297 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 LBX2Q6XYB7 198 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 TEX11Q8IYF3 940 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 ANKRD13CQ8N6S4 541 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 SOCS4Q8WXH5 440 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 C12orf42Q96LP6 360 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 ASCC2Q9H1I8 757 aaPredicted RBP7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 EHD4Q9H223 541 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 RAI14Q9P0K7 980 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 RBM27Q9P2N5 1060 aaKnown RBP7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 BIN2Q9UBW5 565 aaPredicted RBP7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 FPGT-TNNI3KV9GXZ4 949 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 FLT1P17948 1338 aa7.49□□□□□ -1.21
LSM3P4-201ENST00000502948 FRMPD3Q5JV73 1810 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 MAPK4P31152 587 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 HMGCS2P54868 508 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 RRP1BQ14684 758 aaKnown RBP7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 PI16Q6UXB8 463 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 CHRDL2Q6WN34 429 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 TBC1D9Q6ZT07 1266 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 NECAB2Q7Z6G3 386 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 SH3RF3Q8TEJ3 882 aaPredicted RBP7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 USP6NLQ92738 828 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 DEFB118Q96PH6 123 aa7.48□□□□□ -1.21
LSM3P4-201ENST00000502948 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms