RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
NR1I3-216ENST00000502848 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
NR1I3-216ENST00000502848 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
NR1I3-216ENST00000502848 WDR33Q9C0J8 1336 aaKnown RBP10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 B4E1Z4 1266 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 FZD9O00144 591 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 PSMD14O00487 310 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CDKL5O76039 1030 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CALM1P0DP23 149 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CALM2P0DP24 149 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CALM3P0DP25 149 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 PTMSP20962 102 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
NR1I3-216ENST00000502848 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 MAP3K14Q99558 947 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 LY9Q9HBG7 655 aa10.65□□□□□ -0.7
NR1I3-216ENST00000502848 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-216ENST00000502848 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 IFIT3O14879 490 aaKnown RBP10.64□□□□□ -0.71
NR1I3-216ENST00000502848 LARGE1O95461 756 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 GABPAQ06546 454 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 WTAPQ15007 396 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 SEC23AQ15436 765 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 CYB5R4Q7L1T6 521 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 METTL16Q86W50 562 aaKnown RBP10.64□□□□□ -0.71
NR1I3-216ENST00000502848 DGKHQ86XP1 1220 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 KIAA0825Q8IV33 1275 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 SMARCC2Q8TAQ2 1214 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 ANKS1AQ92625 1134 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-216ENST00000502848 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 TMOD2Q9NZR1 351 aa10.64□□□□□ -0.71
NR1I3-216ENST00000502848 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 ZC3H4Q9UPT8 1303 aaKnown RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 GOLGA8BA8MQT2 603 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 DDAH1O94760 285 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 LMNB1P20700 586 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 NOVP48745 357 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 SCNN1DP51172 638 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 EIF6P56537 245 aaKnown RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 CXCL9Q07325 125 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 ST3GAL1Q11201 340 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 NLGN2Q8NFZ4 835 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 ZBED3Q96IU2 234 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 CCDC17Q96LX7 622 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 TCEANC2Q96MN5 208 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 ZSCAN10Q96SZ4 725 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-216ENST00000502848 MKNK2Q9HBH9 465 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 KCNQ5Q9NR82 932 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 ATP6V1DQ9Y5K8 247 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
NR1I3-216ENST00000502848 TNKSO95271 1327 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 STK36Q9NRP7 1315 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 F8W031 263 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-216ENST00000502848 ZBTB43O43298 467 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 MYO1BO43795 1136 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 BRD1O95696 1058 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 SCRN1Q12765 414 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 DLGAP5Q15398 846 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 CFAP100Q494V2 611 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
NR1I3-216ENST00000502848 FAM83AQ86UY5 434 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-216ENST00000502848 FAM177A1Q8N128 213 aaPredicted RBP10.62□□□□□ -0.71
NR1I3-216ENST00000502848 TOMM22Q9NS69 142 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 SYNPO2Q9UMS6 1093 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
NR1I3-216ENST00000502848 BAZ2AQ9UIF9 1905 aaKnown RBP10.62□□□□□ -0.71
NR1I3-216ENST00000502848 TSPY2A6NKD2 308 aa10.61□□□□□ -0.71
NR1I3-216ENST00000502848 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
NR1I3-216ENST00000502848 RAD17O75943 681 aa10.61□□□□□ -0.71
NR1I3-216ENST00000502848 RASA1P20936 1047 aa10.61□□□□□ -0.71
NR1I3-216ENST00000502848 GJB2P29033 226 aa10.61□□□□□ -0.71
NR1I3-216ENST00000502848 CDK8P49336 464 aa10.61□□□□□ -0.71
NR1I3-216ENST00000502848 METAP2P50579 478 aaKnown RBP eCLIP10.61□□□□□ -0.71
NR1I3-216ENST00000502848 TNFAIP1Q13829 316 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms