RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 COL6A1P12109 1028 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 PTPRAP18433 802 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 KCNQ1P51787 676 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 NFKBIBQ15653 356 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 TWISTNBQ3B726 338 aaPredicted RBP6.36□□□□□ -1.39
HTT-202ENST00000502820 TRIM60Q495X7 471 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 FAM83AQ86UY5 434 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 WDR63Q8IWG1 891 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 SCYL3Q8IZE3 742 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 TDRD7Q8NHU6 1098 aaKnown RBP6.36□□□□□ -1.39
HTT-202ENST00000502820 FAM151AQ8WW52 585 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 PAGR1Q9BTK6 254 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 USP40Q9NVE5 1235 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 AGTPBP1Q9UPW5 1226 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 ZNF521Q96K83 1311 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 ZNF646O15015 1829 aaPredicted RBP6.35□□□□□ -1.39
HTT-202ENST00000502820 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.35□□□□□ -1.39
HTT-202ENST00000502820 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.35□□□□□ -1.39
HTT-202ENST00000502820 GRXCR1A8MXD5 290 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 RAG1P15918 1043 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 PBX2P40425 430 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 IRX3P78415 501 aaPredicted RBP6.35□□□□□ -1.39
HTT-202ENST00000502820 NFIAQ12857 509 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 SPP2Q13103 211 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 PICALMQ13492 652 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 FAM110CQ1W6H9 321 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 CAVIN4Q5BKX8 364 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 LHX8Q68G74 356 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 APOBEC3HQ6NTF7 200 aaKnown RBP6.35□□□□□ -1.39
HTT-202ENST00000502820 KSR2Q6VAB6 950 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 G2E3Q7L622 706 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 SH3RF1Q7Z6J0 888 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 ZFPM1Q8IX07 1006 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 MAP7D2Q96T17 732 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 GJD2Q9UKL4 321 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 AFG3L2Q9Y4W6 797 aa6.35□□□□□ -1.39
HTT-202ENST00000502820 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 SYNGAP1Q96PV0 1343 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 FAM196BA6NMK8 535 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 KBTBD13C9JR72 458 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 H7C1W4 665 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 VAMP4O75379 141 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 TPM2P07951 284 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 PTMSP20962 102 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 CLCN1P35523 988 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 GCLCP48506 637 aaPredicted RBP6.34□□□□□ -1.39
HTT-202ENST00000502820 EPHB4P54760 987 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 HMGCS2P54868 508 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 ATP2B2Q01814 1243 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 PABPC4Q13310 644 aaKnown RBP eCLIP6.34□□□□□ -1.39
HTT-202ENST00000502820 AAMPQ13685 434 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 GCKRQ14397 625 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 BECN1Q14457 450 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 DIXDC1Q155Q3 683 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 NOL9Q5SY16 702 aaKnown RBP6.34□□□□□ -1.39
HTT-202ENST00000502820 MFSD14CQ5VZR4 134 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 CDC42EP5Q6NZY7 148 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 LMBR1LQ6UX01 489 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 SLC39A5Q6ZMH5 540 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 CENPQQ7L2Z9 268 aaPredicted RBP6.34□□□□□ -1.39
HTT-202ENST00000502820 FAM9BQ8IZU0 186 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 TBC1D22AQ8WUA7 517 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 FAM84BQ96KN1 310 aaPredicted RBP6.34□□□□□ -1.39
HTT-202ENST00000502820 ZDHHC15Q96MV8 337 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 P2RX7Q99572 595 aaKnown RBP6.34□□□□□ -1.39
HTT-202ENST00000502820 STK31Q9BXU1 1019 aa6.34□□□□□ -1.39
HTT-202ENST00000502820 ASCC2Q9H1I8 757 aaPredicted RBP6.34□□□□□ -1.39
HTT-202ENST00000502820 TRIM43BA6NCK2 446 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 DNM1LO00429 736 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 PQBP1O60828 265 aaKnown RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 SLC4A2P04920 1241 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 HSP90AA1P07900 732 aaKnown RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 CYP2C19P33261 490 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 RGS2P41220 211 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 ADCYAP1R1P41586 468 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 TERF1P54274 439 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 CASP7P55210 303 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 EXOSC9Q06265 439 aaKnown RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 FLIIQ13045 1269 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 HSP90AA2PQ14568 343 aaPredicted RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 CSPP1Q1MSJ5 1256 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 C15orf52Q6ZUT6 534 aaKnown RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 MTERF4Q7Z6M4 381 aaKnown RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 GPRC5AQ8NFJ5 357 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 SOCS4Q8WXH5 440 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 TRIM43Q96BQ3 446 aaPredicted RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 MYH16Q9H6N6 1097 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 TMEM39AQ9NV64 488 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 DDX20Q9UHI6 824 aaKnown RBP6.33□□□□□ -1.4
HTT-202ENST00000502820 ZNF112Q9UJU3 913 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 SLC45A1Q9Y2W3 748 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 OTOFQ9HC10 1997 aa6.33□□□□□ -1.4
HTT-202ENST00000502820 MAST3O60307 1309 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 CDH23Q9H251 3354 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 SMIM22K7EJ46 135 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 CSF1RP07333 972 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
HTT-202ENST00000502820 TLE2Q04725 743 aa6.32□□□□□ -1.4
HTT-202ENST00000502820 FPGSQ05932 587 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms