RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 ZFPM1Q8IX07 1006 aa8.6□□□□□ -1.03
CPNE4-202ENST00000502818 EYA3Q99504 573 aa8.6□□□□□ -1.03
CPNE4-202ENST00000502818 TMX4Q9H1E5 349 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-202ENST00000502818 GDPD2Q9HCC8 539 aa8.6□□□□□ -1.03
CPNE4-202ENST00000502818 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-202ENST00000502818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.6□□□□□ -1.03
CPNE4-202ENST00000502818 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-202ENST00000502818 PTPDC1A2A3K4 754 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 GOLGA8BA8MQT2 603 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 STX6O43752 255 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 RAD17O75943 681 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 CLCN1P35523 988 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 PRELPP51888 382 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 PICALMQ13492 652 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 MCTP1Q6DN14 999 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 OTUD7BQ6GQQ9 843 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 APOBEC3HQ6NTF7 200 aaKnown RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 TEX11Q8IYF3 940 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 FBXL16Q8N461 479 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 TBC1D22AQ8WUA7 517 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 ANGEL1Q9UNK9 670 aaKnown RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 CCDC88AQ3V6T2 1871 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 RANBP6O60518 1105 aaKnown RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 FGRP09769 529 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 GSTO1P78417 241 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 NFIAQ12857 509 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 C12orf60Q5U649 245 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 MICU3Q86XE3 530 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 SMARCC2Q8TAQ2 1214 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 CHMP4CQ96CF2 233 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 ZNF274Q96GC6 653 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 AIFM3Q96NN9 605 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 ATP8A2Q9NTI2 1148 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 TAOK2Q9UL54 1235 aa8.59□□□□□ -1.03
CPNE4-202ENST00000502818 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-202ENST00000502818 FLT1P17948 1338 aa8.59□□□□□ -1.04
CPNE4-202ENST00000502818 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 VPS37CA5D8V6 355 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-202ENST00000502818 WDHD1O75717 1129 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-202ENST00000502818 LDHCP07864 332 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-202ENST00000502818 CRKP46108 304 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 SEC23AQ15436 765 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 CCDC93Q567U6 631 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 LARP1BQ659C4 914 aaKnown RBP8.58□□□□□ -1.04
CPNE4-202ENST00000502818 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 GIMAP6Q6P9H5 292 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 APOA5Q6Q788 366 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 CLEC17AQ6ZS10 378 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 DLEC1Q9Y238 1755 aa8.58□□□□□ -1.04
CPNE4-202ENST00000502818 ZNF646O15015 1829 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-202ENST00000502818 USP17L3A6NCW0 530 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 USP17L4A6NCW7 530 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 PSMD14O00487 310 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 BAG3O95817 575 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 POLD1P28340 1107 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 STRIP1Q5VSL9 837 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 RASGRP2Q7LDG7 609 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 USP17L1Q7RTZ2 530 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 ENAHQ8N8S7 591 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-202ENST00000502818 KRT23Q9C075 422 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 USP40Q9NVE5 1235 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 TNKSO95271 1327 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 WDR19Q8NEZ3 1342 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 KIF13BQ9NQT8 1826 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 NFKBIEO00221 500 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 F13A1P00488 732 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 TGFB2P61812 414 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 RASSF7Q02833 373 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 SHROOM1Q2M3G4 852 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-202ENST00000502818 TPRNQ4KMQ1 711 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 PHKBQ93100 1093 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 CNNM2Q9H8M5 875 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 IL17RBQ9NRM6 502 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 LMBRD1Q9NUN5 540 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 ARPP21Q9UBL0 812 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-202ENST00000502818 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 CNPY2Q9Y2B0 182 aa8.57□□□□□ -1.04
CPNE4-202ENST00000502818 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 POLR3DP05423 398 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 GUCY1A2P33402 732 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 WTAPQ15007 396 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 NTRK3Q16288 839 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 DALRD3Q5D0E6 543 aaKnown RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 SGMS1Q86VZ5 419 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 ESR2Q92731 530 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 TMEM87BQ96K49 555 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 NAP1L5Q96NT1 182 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms