RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 PDE3BQ13370 1112 aa8.78□□□□□ -1
CRNDE-201ENST00000501177 MUC3BQ9H195 1237 aa8.78□□□□□ -1
CRNDE-201ENST00000501177 ELP3Q9H9T3 547 aa8.78□□□□□ -1
CRNDE-201ENST00000501177 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
CRNDE-201ENST00000501177 KANSL3Q9P2N6 904 aa8.78□□□□□ -1
CRNDE-201ENST00000501177 RNF112Q9ULX5 631 aa8.78□□□□□ -1
CRNDE-201ENST00000501177 GLB1P16278 677 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 EPHA1P21709 976 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 CDC27P30260 824 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 CACTIN-AS1Q8N1I8 211 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 PMFBP1Q8TBY8 1022 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 CCDC97Q96F63 343 aaPredicted RBP8.77□□□□□ -1.01
CRNDE-201ENST00000501177 SPACA7Q96KW9 195 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1.01
CRNDE-201ENST00000501177 PBX4Q9BYU1 374 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 C14orf93Q9H972 538 aaKnown RBP8.77□□□□□ -1.01
CRNDE-201ENST00000501177 MYOM1P52179 1685 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 SSH2Q76I76 1423 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 PEAK1Q9H792 1746 aa8.77□□□□□ -1.01
CRNDE-201ENST00000501177 KIAA0232Q92628 1395 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 LMO7Q8WWI1 1683 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 A6NHS1 94 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
CRNDE-201ENST00000501177 SMNDC1O75940 238 aaKnown RBP eCLIP8.76□□□□□ -1.01
CRNDE-201ENST00000501177 FSTP19883 344 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 CD68P34810 354 aaPredicted RBP8.76□□□□□ -1.01
CRNDE-201ENST00000501177 NBPF11Q86T75 865 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 PRAM1Q96QH2 718 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 GGNBP2Q9H3C7 697 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 THRAP3Q9Y2W1 955 aaKnown RBP8.76□□□□□ -1.01
CRNDE-201ENST00000501177 OVOS2A0A0G2JMS6 1433 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 OVOS2A0A0J9YW53 1432 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 OVOS2Q6IE36 1432 aa8.76□□□□□ -1.01
CRNDE-201ENST00000501177 ADAM11O75078 769 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 RGL3Q3MIN7 710 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 PDE12Q6L8Q7 609 aaKnown RBP8.75□□□□□ -1.01
CRNDE-201ENST00000501177 ZNF438Q7Z4V0 828 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 NCAPG2Q86XI2 1143 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 EDEM1Q92611 657 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 AKAP12Q02952 1782 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 WNK3Q9BYP7 1800 aa8.75□□□□□ -1.01
CRNDE-201ENST00000501177 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 FSCN2O14926 492 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 PLSCR1O15162 318 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 C1QTNF8P60827 252 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 KIAA1211Q6ZU35 1233 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 ACAD11Q709F0 780 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 ARMC10Q8N2F6 343 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 TCP11L2Q8N4U5 519 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 C1orf127Q8N9H9 656 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
CRNDE-201ENST00000501177 POGKQ9P215 609 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 SALL4Q9UJQ4 1053 aa8.74□□□□□ -1.01
CRNDE-201ENST00000501177 CPDO75976 1380 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 ADGRB1O14514 1584 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 LRRC37A3O60309 1634 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 TOPAZ1Q8N9V7 1692 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 NFKBIEO00221 500 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 TRPA1O75762 1119 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 DNM1Q05193 864 aaKnown RBP8.73□□□□□ -1.01
CRNDE-201ENST00000501177 NGDNQ8NEJ9 315 aaKnown RBP8.73□□□□□ -1.01
CRNDE-201ENST00000501177 DCAF11Q8TEB1 546 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 CHRDQ9H2X0 955 aa8.73□□□□□ -1.01
CRNDE-201ENST00000501177 PDGFAP04085 211 aa8.72□□□□□ -1.01
CRNDE-201ENST00000501177 EVA1CP58658 441 aa8.72□□□□□ -1.01
CRNDE-201ENST00000501177 MTMR3Q13615 1198 aa8.72□□□□□ -1.01
CRNDE-201ENST00000501177 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
CRNDE-201ENST00000501177 UBASH3BQ8TF42 649 aa8.72□□□□□ -1.01
CRNDE-201ENST00000501177 KLHDC7BQ96G42 594 aa8.72□□□□□ -1.01
CRNDE-201ENST00000501177 ADAM19Q9H013 955 aa8.72□□□□□ -1.01
CRNDE-201ENST00000501177 BCL9O00512 1426 aa8.71□□□□□ -1.01
CRNDE-201ENST00000501177 ARHGEF28Q8N1W1 1705 aaKnown RBP8.71□□□□□ -1.01
CRNDE-201ENST00000501177 TMEM88BA6NKF7 163 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 PTPRAP18433 802 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 MPSTP25325 297 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
CRNDE-201ENST00000501177 XKR5Q6UX68 686 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.02
CRNDE-201ENST00000501177 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 RAXQ9Y2V3 346 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 PRR36Q9H6K5 1346 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 MAP3K5Q99683 1374 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 CRB1P82279 1406 aa8.71□□□□□ -1.02
CRNDE-201ENST00000501177 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
CRNDE-201ENST00000501177 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
CRNDE-201ENST00000501177 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
CRNDE-201ENST00000501177 DZANK1Q9NVP4 752 aa8.7□□□□□ -1.02
CRNDE-201ENST00000501177 AATKQ6ZMQ8 1374 aa8.7□□□□□ -1.02
CRNDE-201ENST00000501177 CEP350Q5VT06 3117 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 MED26O95402 600 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 CES1P23141 567 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 SSFA2P28290 1259 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 SSTR4P31391 388 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CRNDE-201ENST00000501177 DUOXA2Q1HG44 320 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 C8orf34Q49A92 452 aa8.69□□□□□ -1.02
CRNDE-201ENST00000501177 HGSNATQ68CP4 663 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms