RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
LSAMP-206ENST00000498645 FOCADQ5VW36 1801 aa13.54□□□□□ -0.24
LSAMP-206ENST00000498645 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
LSAMP-206ENST00000498645 BAG3O95817 575 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 MAP4K4O95819 1239 aaPredicted RBP13.53□□□□□ -0.24
LSAMP-206ENST00000498645 BCRP11274 1271 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 GRK4P32298 578 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 PRKCZQ05513 592 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 MTFR1Q15390 333 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
LSAMP-206ENST00000498645 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 TLR7Q9NYK1 1049 aaKnown RBP13.53□□□□□ -0.24
LSAMP-206ENST00000498645 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
LSAMP-206ENST00000498645 CEP290O15078 2479 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 LOC285556D6RIA3 1793 aa13.53□□□□□ -0.24
LSAMP-206ENST00000498645 TBC1D12O60347 775 aa13.52□□□□□ -0.25
LSAMP-206ENST00000498645 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
LSAMP-206ENST00000498645 ZAP70P43403 619 aa13.52□□□□□ -0.25
LSAMP-206ENST00000498645 SPP2Q13103 211 aa13.52□□□□□ -0.25
LSAMP-206ENST00000498645 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
LSAMP-206ENST00000498645 ADGRA1Q86SQ6 560 aa13.52□□□□□ -0.25
LSAMP-206ENST00000498645 AGTPBP1Q9UPW5 1226 aa13.52□□□□□ -0.25
LSAMP-206ENST00000498645 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
LSAMP-206ENST00000498645 PLCG2P16885 1265 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 CAP2P40123 477 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 HMGCS2P54868 508 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 ANKRD13CQ8N6S4 541 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
LSAMP-206ENST00000498645 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
LSAMP-206ENST00000498645 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 SLC45A1Q9Y2W3 748 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 MYH1P12882 1939 aa13.51□□□□□ -0.25
LSAMP-206ENST00000498645 FLT1P17948 1338 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 TNPO2O14787 897 aaKnown RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 CRACR2BQ8N4Y2 399 aaPredicted RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 GCC1Q96CN9 775 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 RNF208Q9H0X6 261 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 PI4KBQ9UBF8 816 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 HERC5Q9UII4 1024 aaKnown RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
LSAMP-206ENST00000498645 NDUFB9Q9Y6M9 179 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
LSAMP-206ENST00000498645 ZBED9Q6R2W3 1325 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 CCL5P13501 91 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 ELNP15502 786 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 CYP7A1P22680 504 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
LSAMP-206ENST00000498645 UBXN2AP68543 259 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 CEP85Q6P2H3 762 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
LSAMP-206ENST00000498645 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
LSAMP-206ENST00000498645 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
LSAMP-206ENST00000498645 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
LSAMP-206ENST00000498645 APBB1O00213 710 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 ADCY3O60266 1144 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 GDF11O95390 407 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 FLT3LGP49771 235 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 MTMR2Q13614 643 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 AACSQ86V21 672 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 MIGA1Q8NAN2 632 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 ZNF512BQ96KM6 892 aaPredicted RBP13.48□□□□□ -0.25
LSAMP-206ENST00000498645 TBC1D2Q9BYX2 928 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 AS3MTQ9HBK9 375 aa13.48□□□□□ -0.25
LSAMP-206ENST00000498645 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 USP5P45974 858 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 PPP4CP60510 307 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.25
LSAMP-206ENST00000498645 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
LSAMP-206ENST00000498645 MAGEB6Q8N7X4 407 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 COA7Q96BR5 231 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 UNC93B1Q9H1C4 597 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 IL1RAPL2Q9NP60 686 aa13.47□□□□□ -0.25
LSAMP-206ENST00000498645 INHAP05111 366 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 ASNSP08243 561 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 JAG1P78504 1218 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 FAM110CQ1W6H9 321 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
LSAMP-206ENST00000498645 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 DPF3Q92784 378 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
LSAMP-206ENST00000498645 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
LSAMP-206ENST00000498645 TMOD4Q9NZQ9 345 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms