RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 MS4A4AQ96JQ5 239 aa15.46■□□□□ 0.07
HSPG2-213ENST00000498495 CRNKL1Q9BZJ0 848 aaKnown RBP15.46■□□□□ 0.07
HSPG2-213ENST00000498495 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.06
HSPG2-213ENST00000498495 CCL15-CCL14A0A0B4J2E2 113 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 FAM196BA6NMK8 535 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 CETPP11597 493 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 SNAPC2Q13487 334 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 CCL15Q16663 113 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 SLFNL1Q499Z3 407 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 TTC6Q86TZ1 520 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 PI4K2BQ8TCG2 481 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 PTPN18Q99952 460 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 ARMT1Q9H993 441 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 ZHX2Q9Y6X8 837 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 DOCK2Q92608 1830 aa15.45■□□□□ 0.06
HSPG2-213ENST00000498495 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
HSPG2-213ENST00000498495 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-213ENST00000498495 SLC4A8Q2Y0W8 1093 aa15.44■□□□□ 0.06
HSPG2-213ENST00000498495 LRRFIP1Q32MZ4 808 aaKnown RBP15.44■□□□□ 0.06
HSPG2-213ENST00000498495 TNS4Q8IZW8 715 aa15.44■□□□□ 0.06
HSPG2-213ENST00000498495 LCORLQ8N3X6 602 aa15.44■□□□□ 0.06
HSPG2-213ENST00000498495 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
HSPG2-213ENST00000498495 OTOFQ9HC10 1997 aa15.44■□□□□ 0.06
HSPG2-213ENST00000498495 RNF113AO15541 343 aaKnown RBP15.43■□□□□ 0.06
HSPG2-213ENST00000498495 MBD4O95243 580 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 CHGBP05060 677 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 ZFYP08048 801 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-213ENST00000498495 PTPRAP18433 802 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 CAP2P40123 477 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 CHD1LQ86WJ1 897 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 SDR42E1Q8WUS8 393 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 BRI3BPQ8WY22 251 aa15.43■□□□□ 0.06
HSPG2-213ENST00000498495 CXCL11O14625 94 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 PDE1AP54750 535 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 METTL16Q86W50 562 aaKnown RBP15.42■□□□□ 0.06
HSPG2-213ENST00000498495 CFHR5Q9BXR6 569 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 PUS7LQ9H0K6 701 aaKnown RBP15.42■□□□□ 0.06
HSPG2-213ENST00000498495 MCM9Q9NXL9 1143 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 STAP2Q9UGK3 403 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 KCNH4Q9UQ05 1017 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 SALL3Q9BXA9 1300 aa15.42■□□□□ 0.06
HSPG2-213ENST00000498495 GPR25O00155 361 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 PRKAB2O43741 272 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 NUCB1Q02818 461 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 R3HDMLQ9H3Y0 253 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 DCP1AQ9NPI6 582 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-213ENST00000498495 ATP8A2Q9NTI2 1148 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 AFG3L2Q9Y4W6 797 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 SLC4A4Q9Y6R1 1079 aa15.41■□□□□ 0.06
HSPG2-213ENST00000498495 PLCD1P51178 756 aa15.4■□□□□ 0.06
HSPG2-213ENST00000498495 RRP1BQ14684 758 aaKnown RBP15.4■□□□□ 0.06
HSPG2-213ENST00000498495 FAM43AQ8N2R8 423 aa15.4■□□□□ 0.06
HSPG2-213ENST00000498495 APPBP2Q92624 585 aa15.4■□□□□ 0.06
HSPG2-213ENST00000498495 EHD4Q9H223 541 aa15.4■□□□□ 0.06
HSPG2-213ENST00000498495 ZFYVE28Q9HCC9 887 aa15.4■□□□□ 0.06
HSPG2-213ENST00000498495 USP17L5A8MUK1 530 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 BTBD19C9JJ37 291 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 FKTNO75072 461 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 ASNSP08243 561 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 CRHR2Q13324 411 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 TAF1CQ15572 869 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 NOM1Q5C9Z4 860 aaKnown RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 FASTKD5Q7L8L6 764 aaKnown RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 AMOTL1Q8IY63 956 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 ZNF296Q8WUU4 475 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 OSBP2Q969R2 916 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 EVI5LQ96CN4 794 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 STRBPQ96SI9 672 aaKnown RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 TBC1D2Q9BYX2 928 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 DNAJC18Q9H819 358 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 AS3MTQ9HBK9 375 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 ZCCHC17Q9NP64 241 aaKnown RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 GINM1Q9NU53 330 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-213ENST00000498495 CDK5RAP2Q96SN8 1893 aa15.39■□□□□ 0.05
HSPG2-213ENST00000498495 TRIM75PA6NK02 468 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 GDF11O95390 407 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 SPP2Q13103 211 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 CERKLQ49MI3 558 aaPredicted RBP15.38■□□□□ 0.05
HSPG2-213ENST00000498495 TATDN1Q6P1N9 297 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 ANKRD23Q86SG2 305 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 ZNF280CQ8ND82 737 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 FOCADQ5VW36 1801 aa15.38■□□□□ 0.05
HSPG2-213ENST00000498495 MYH1P12882 1939 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
HSPG2-213ENST00000498495 TRIM6-TRIM34B2RNG4 842 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 USP17L21D6R901 530 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 DGKZQ13574 1117 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 GADL1Q6ZQY3 521 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
HSPG2-213ENST00000498495 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 CABP5Q9NP86 173 aa15.37■□□□□ 0.05
HSPG2-213ENST00000498495 PDHXO00330 501 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 GPAA1O43292 621 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms