RNA–Protein interactions for RNA: ENST00000498449.5

SYNPR-215, Transcript of synaptoporin, humanhuman

TSL 2

Gene SYNPR, Length 1,296 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-215ENST00000498449 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 HMGB1P09429 215 aaKnown RBP16.28■□□□□ 0.2
SYNPR-215ENST00000498449 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
SYNPR-215ENST00000498449 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
SYNPR-215ENST00000498449 TRDNQ13061 729 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 DHX36Q9H2U1 1008 aaKnown RBP16.28■□□□□ 0.2
SYNPR-215ENST00000498449 CNNM2Q9H8M5 875 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 HACL1Q9UJ83 578 aa16.28■□□□□ 0.2
SYNPR-215ENST00000498449 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
SYNPR-215ENST00000498449 B4E1Z4 1266 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 ORC4O43929 436 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 ST18O60284 1047 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 TNNI2P48788 182 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 PDE4BQ07343 736 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 DHX32Q7L7V1 743 aaKnown RBP16.27■□□□□ 0.2
SYNPR-215ENST00000498449 IL27Q8NEV9 243 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 TTC14Q96N46 770 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 KRT23Q9C075 422 aa16.27■□□□□ 0.2
SYNPR-215ENST00000498449 CD2BP2O95400 341 aaKnown RBP16.26■□□□□ 0.19
SYNPR-215ENST00000498449 EXOSC10Q01780 885 aaKnown RBP16.26■□□□□ 0.19
SYNPR-215ENST00000498449 GABPAQ06546 454 aa16.26■□□□□ 0.19
SYNPR-215ENST00000498449 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
SYNPR-215ENST00000498449 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
SYNPR-215ENST00000498449 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
SYNPR-215ENST00000498449 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
SYNPR-215ENST00000498449 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
SYNPR-215ENST00000498449 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
SYNPR-215ENST00000498449 EHD4Q9H223 541 aa16.26■□□□□ 0.19
SYNPR-215ENST00000498449 TOMM22Q9NS69 142 aa16.26■□□□□ 0.19
SYNPR-215ENST00000498449 GREB1LQ9C091 1923 aaPredicted RBP16.25■□□□□ 0.19
SYNPR-215ENST00000498449 IQCA1LA6NCM1 817 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 KDM4AO75164 1064 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 PRDM1O75626 825 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 MCM5P33992 734 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 EPHX2P34913 555 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 CDK8P49336 464 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 ANTXR2P58335 489 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
SYNPR-215ENST00000498449 SNX21Q969T3 373 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 PI4KBQ9UBF8 816 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 PGAP2Q9UHJ9 254 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
SYNPR-215ENST00000498449 WDR19Q8NEZ3 1342 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 PITPNM2Q9BZ72 1349 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 POTECB2RU33 542 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 PRC1O43663 620 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 NT5C2P49902 561 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 RASA3Q14644 834 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
SYNPR-215ENST00000498449 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
SYNPR-215ENST00000498449 ESR2Q92731 530 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 ALDH8A1Q9H2A2 487 aaPredicted RBP16.24■□□□□ 0.19
SYNPR-215ENST00000498449 TAF1DQ9H5J8 278 aaPredicted RBP16.24■□□□□ 0.19
SYNPR-215ENST00000498449 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
SYNPR-215ENST00000498449 SCAF8Q9UPN6 1271 aaKnown RBP16.24■□□□□ 0.19
SYNPR-215ENST00000498449 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
SYNPR-215ENST00000498449 RASA1P20936 1047 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 AK2P54819 239 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 CRACR2BQ8N4Y2 399 aaPredicted RBP16.23■□□□□ 0.19
SYNPR-215ENST00000498449 LRRC2Q9BYS8 371 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 DNAJC18Q9H819 358 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 ATAD5Q96QE3 1844 aa16.23■□□□□ 0.19
SYNPR-215ENST00000498449 FAM196BA6NMK8 535 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 SLURP2P0DP57 97 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 SHMT1P34896 483 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 TOB2Q14106 344 aaPredicted RBP16.22■□□□□ 0.19
SYNPR-215ENST00000498449 Q6ZUG5 572 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 FOXP4Q8IVH2 680 aaPredicted RBP16.22■□□□□ 0.19
SYNPR-215ENST00000498449 HSCBQ8IWL3 235 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 TEPSINQ96N21 525 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 AGXT2Q9BYV1 514 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 ZSWIM5Q9P217 1185 aa16.22■□□□□ 0.19
SYNPR-215ENST00000498449 MCM2P49736 904 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 BECN1Q14457 450 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 FAM47AQ5JRC9 791 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 ZNF444Q8N0Y2 327 aaPredicted RBP16.21■□□□□ 0.19
SYNPR-215ENST00000498449 FBXL16Q8N461 479 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
SYNPR-215ENST00000498449 PPP2R3BQ9Y5P8 575 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 MYH4Q9Y623 1939 aa16.21■□□□□ 0.19
SYNPR-215ENST00000498449 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms