RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CSADQ9Y600 493 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SYCP2Q9BX26 1530 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SALL3Q9BXA9 1300 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 MEIOCA2RUB1 952 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 BACH1O14867 736 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 ANKRD28O15084 1053 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CD3DP04234 171 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TACR1P25103 407 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CLK2P49760 499 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 RBM10P98175 930 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 RELBQ01201 579 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SKIV2LQ15477 1246 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 OXLD1Q5BKU9 147 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 FAAH2Q6GMR7 532 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PRICKLE2Q7Z3G6 844 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 NLRP8Q86W28 1048 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SVOPQ8N4V2 548 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CELF1Q92879 486 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 PGBD1Q96JS3 809 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SERINC1Q9NRX5 453 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 FAM217BQ9NTX9 383 aaPredicted RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 EVA1BQ9NVM1 165 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TELO2Q9Y4R8 837 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SLC30A1Q9Y6M5 507 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TOPAZ1Q8N9V7 1692 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 HFM1A2PYH4 1435 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ANO9A1A5B4 782 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 H3BNX3 289 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 PPP1R2P9O14990 202 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 GRID2O43424 1007 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 PRAMEF2O60811 474 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 FOSL2P15408 326 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ITGAEP38570 1179 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 CDK8P49336 464 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 MORC3Q14149 939 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 PDE3AQ14432 1141 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 CBX2Q14781 532 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 CC2D1BQ5T0F9 858 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 OTUD3Q5T2D3 398 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 CDKAL1Q5VV42 579 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ZYG11AQ6WRX3 759 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 HFE2Q6ZVN8 426 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 CACTIN-AS1Q8N1I8 211 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 MPP5Q8N3R9 675 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SH2D3CQ8N5H7 860 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 CHST13Q8NET6 341 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ATXN2LQ8WWM7 1075 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 NANOS1Q8WY41 292 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 IWS1Q96ST2 819 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 FXYD6Q9H0Q3 95 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 IL1RAPL2Q9NP60 686 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ORC3Q9UBD5 711 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.74□□□□□ -2.13
XRN1-214ENST00000498077 ZNF214Q9UL59 606 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 PCDHAC2Q9Y5I4 1007 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SQORQ9Y6N5 450 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 PER1O15534 1290 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 RASA4O43374 803 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ZNF10P21506 573 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 MLLT3P42568 568 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 ART1P52961 327 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SCRN1Q12765 414 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 NNTQ13423 1086 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 AMHR2Q16671 573 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 TMEM132AQ24JP5 1023 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 TYSND1Q2T9J0 566 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ARHGEF16Q5VV41 709 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 LIAT1Q6ZQX7 453 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SLC24A5Q71RS6 500 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ZC3HAV1Q7Z2W4 902 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 TRIM50Q86XT4 487 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 NME9Q86XW9 330 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ZFAND2BQ8WV99 257 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 NOL10Q9BSC4 688 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 ANO3Q9BYT9 981 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 TBC1D2Q9BYX2 928 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 FTOQ9C0B1 505 aaKnown RBP eCLIP1.74□□□□□ -2.13
XRN1-214ENST00000498077 CTNNAL1Q9UBT7 734 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 EDARQ9UNE0 448 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 AP4E1Q9UPM8 1137 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 LTBP1Q14766 1721 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 LRRK2Q5S007 2527 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ADGRB3O60242 1522 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SLIT1O75093 1534 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 PLSCR1O15162 318 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 GPC1P35052 558 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 CDR1P51861 262 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 RPS15P62841 145 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 ARHGAP4P98171 946 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 FUT2Q10981 343 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 NEUROD2Q15784 382 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 EFHC2Q5JST6 749 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 C3orf20Q8ND61 904 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 UBE2Q2Q8WVN8 375 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 BAP1Q92560 729 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ZNF516Q92618 1163 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 KRTAP9-2Q9BYQ4 174 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 UNC93B1Q9H1C4 597 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 TIMMDC1Q9NPL8 285 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms